PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr022557.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family EIL
Protein Properties Length: 434aa    MW: 48705.9 Da    PI: 5.7691
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr022557.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3390.23e-119303311294
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +elkkrmwkd ++l++lke++k  +e++e +   ++s+  +e + rkkm+raQD+iLkYM+k+mevc+a+GfvYgi+pekgkpv+g+sdsLr+WWk+k
  Pbr022557.1  30 DELKKRMWKDSIRLQKLKENRKI-IEAEEDEEVPAESSAKQEGSHRKKMARAQDSILKYMVKIMEVCKAKGFVYGIVPEKGKPVTGSSDSLREWWKDK 126
                  79******************997.55555555555689999********************************************************* PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                   +fd n+p+ai++y    li++ges+      s+ h l+elqDTtlgSLLsal+qhc ppqrrfplekg++pPWWPtGke wwg +gls ++g+ppy+
  Pbr022557.1 127 ARFDHNAPIAIAEY-LPALIFEGESDH----GSYAHLLHELQDTTLGSLLSALIQHCVPPQRRFPLEKGLAPPWWPTGKEMWWGDQGLSVEHGAPPYR 219
                  **************.678999988877....89***************************************************************** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXXXXXXXXXXX...... CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtlsceqkedve...... 285
                  kphdlkkawkvs L+av+khm+p+++++r+l+ qsk+lqdkm+ake++++++v+nqee++++        s +++k+ ++++    ++++++      
  Pbr022557.1 220 KPHDLKKAWKVSALAAVVKHMAPNSDRVRRLVTQSKCLQDKMTAKETAIWSKVVNQEESLIQLTEKClkiSDHSNKKGKNLKWPATTSNEKRkmmsid 317
                  **********************************************************9885444443333344444444444444333333334455 PP

                  .....XXXXXX.XX CS
         EIN3 286 .....gkkeskikh 294
                       ++k+s+   
  Pbr022557.1 318 lglgfVEKKSRADY 331
                  55544444443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.8E-11730277No hitNo description
Gene3DG3DSA:1.10.3180.102.3E-66152282IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.14E-58156280IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MVKFHVQVDP LSLGVVAEDE EAAEDHISYD ELKKRMWKDS IRLQKLKENR KIIEAEEDEE  60
VPAESSAKQE GSHRKKMARA QDSILKYMVK IMEVCKAKGF VYGIVPEKGK PVTGSSDSLR  120
EWWKDKARFD HNAPIAIAEY LPALIFEGES DHGSYAHLLH ELQDTTLGSL LSALIQHCVP  180
PQRRFPLEKG LAPPWWPTGK EMWWGDQGLS VEHGAPPYRK PHDLKKAWKV SALAAVVKHM  240
APNSDRVRRL VTQSKCLQDK MTAKETAIWS KVVNQEESLI QLTEKCLKIS DHSNKKGKNL  300
KWPATTSNEK RKMMSIDLGL GFVEKKSRAD YDQGQDQDQT LCASDQNSGA VSVVDWINME  360
IEKANGIDDN SGTKVADGHG STSYWGGGID DDDLAMDGAL EIQRGNMDLN RSSEDMSHNY  420
DQDSTSIWDL GYD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-591542791126Protein ETHYLENE INSENSITIVE 3
4zds_B9e-591542791126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr022557.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009378550.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-121EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A498KMG60.0A0A498KMG6_MALDO; Uncharacterized protein
STRINGXP_009378550.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-121EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]