PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr012187.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 282aa    MW: 31098.8 Da    PI: 8.565
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr012187.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.91.8e-312275255
      G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 prlrWtpeLH++F++a+e+LGG++kA Pk +l+lm+vkgLt++hvkSHLQ+YR+
  Pbr012187.1 22 PRLRWTPELHRCFLQAIERLGGHKKANPKLVLQLMDVKGLTISHVKSHLQMYRS 75
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.0E-311876IPR009057Homeodomain-like
PROSITE profilePS5129411.2461878IPR017930Myb domain
SuperFamilySSF466891.52E-152075IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-232275IPR006447Myb domain, plants
PfamPF002491.5E-92374IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MTTSSCSARN GAVRQYVRSK VPRLRWTPEL HRCFLQAIER LGGHKKANPK LVLQLMDVKG  60
LTISHVKSHL QMYRSMRGDP IIRQDRVQTR KLHSFEEAED DGCVEEVNGL SFYPSSKPTR  120
ESDSQVICNP RRSKRARTET MGSNISEGLQ QQQCGKGGIY ETVSNPYSFD DYVLALGIKE  180
DPHPSAFKIA LQESDFLKVA TLPEAGGAHV EDHHEASQCE LSLSLSLHQP SSHKSNASSS  240
DFSGAISSSY SRPNYKDCSA SSSGNRNRNL NLNLSIALCG T*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-182377357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-182377357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-182377357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-182377357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-182377458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr012187.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018501963.10.0PREDICTED: putative Myb family transcription factor At1g14600
TrEMBLA0A498HI580.0A0A498HI58_MALDO; Uncharacterized protein
STRINGXP_008340524.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.11e-31G2-like family protein