PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr011472.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 682aa    MW: 73069.6 Da    PI: 7.0402
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr011472.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32e-30288347159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  Pbr011472.1 288 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVQRCAEDMSILITTYEGNHNHP 347
                  58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-32273349IPR003657WRKY domain
SuperFamilySSF1182903.53E-27281349IPR003657WRKY domain
PROSITE profilePS5081128.461283349IPR003657WRKY domain
SMARTSM007741.7E-36288348IPR003657WRKY domain
PfamPF031061.5E-26289347IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    Send to blast
MEAALGKSNS HGGSESEEKT VVLESSSIAD EQEAGHKEEI VLKVGNGRPC QENNEVKSSS  60
PKQKDLSCKQ ISTTSNIKGS SAEPDHLVAS TSPSTKEQDC QLESARVEMR EVREENQRLK  120
KYLEQITEEY QTLQMQLYDI QQKANKSKDI AIPSTTKNYD QDEESELVSL SLGSFSGKPK  180
WNQKNDKNPS TSQGKVENES DGESLSLGLD CKYEAPKSSA TTDQVPLANP SPGSSLEEVP  240
KEEAGETWPP RKVLKTVRSS GMEDEVAQQS PAKKARVSVR ARCDTPTMND GCQWRKYGQK  300
IAKGNPCPRA YYRCTIAPSC PVRKQVQRCA EDMSILITTY EGNHNHPLPM SATAMASTTS  360
AAASMLLSGS SSSSSGRLNP SATPTSTAAA HDLHGYNFYL SDNSKSRFYI PNSSLSSSVP  420
TIILDLTSKP SSTSNSMSHF NKFSSSSSSS HQLYPPTSLN FGSNSESSTN MSWSNNGLLS  480
YGTHLPPYNI SNNNQSAPLS SLGIRQLPMQ NNIYQNYMQK NINPHPNPPQ GVPHQFQPDS  540
IAAATKAITS DPSFQSALAA ALTSIIGGNS TVGTTGITGT LGHINQAGGG DSSISLAQKF  600
KWSDHFPGST TTTTSSSSSF LQSQIGNNSS SIGCASSYLN KTAPPNSQPG SLMFLPPSLP  660
FSSAPKSAPT SPDDTRDHKS L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-20275349174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr011472.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009369334.10.0PREDICTED: probable WRKY transcription factor 61 isoform X1
TrEMBLA0A498JMN90.0A0A498JMN9_MALDO; Uncharacterized protein
STRINGXP_009369334.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-62WRKY DNA-binding protein 72