 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG620400.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
MYB_related |
Protein Properties |
Length: 341aa MW: 38297.8 Da PI: 7.8467 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG620400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 34 | 7e-11 | 142 | 185 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
WT+ E+ +++++ +G g+Wk I+r++ ++Rt+ q+ s+ qky
Pavir.9NG620400.1.p 142 WTKLEHRQFLRGLCVYGRGDWKNISRHFVTTRTPVQVSSHAQKY 185
*******************************************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MDPKFNGEWS ASEIRMVKSF IASHNASNNS NDMNKKHNNI VNQLQAWFPL KEKHQVITLY 60 VELVVEMMRQ PGQSGNQSMV AVNNLVNDNY GIPVEDSTMN IMNMPLASLT GKKPEAMRVV 120 EEAPQRQVIV PQQERRQKGR LWTKLEHRQF LRGLCVYGRG DWKNISRHFV TTRTPVQVSS 180 HAQKYFRRME QRTNEKQRYS INDVGLYDDE PRAPNNSSSW KPLTFAGANN PNGYGSSNEL 240 PTMNNLAHAW SSPLPTMNNL AHAWSSPLPT MNNLAHAWSS PFLYSDGQAS SSQATTWTGQ 300 QLGASSSTAL APEGAGSQIA WTGDQQGDFI PEQWMDFDDI *
|