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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.8KG025200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 295aa MW: 32146.7 Da PI: 5.0103 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.8KG025200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 61.8 | 2.1e-19 | 10 | 137 | 1 | 126 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratk.s 80
+pp++rF Pt el+ +yL++ v++ e e v+ +d+y+++P +L + ++ +++ +wyf + ++ k + g+r +ra++
Pavir.8KG025200.1.p 10 VPPCYRFTPTARELIRYYLNPWVANPGqtppfGEPEGVVCAADVYSADPGTLTSrlrRFGHDDGNWYFLCVARWKDGNaGTRMSRAVRgG 99
599*******************99877666642233579999**********853445666777******9999988769*****66648 PP
NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
g+W+ +gk +v + g ++t+ + + g k+ W+m+e+
Pavir.8KG025200.1.p 100 GTWHGSGKRVAVPR-----HGYRQTFEYR---DAAGDKSAWLMEEF 137
99**9999888777.....79*****995...78899********9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MEQQARWPDV PPCYRFTPTA RELIRYYLNP WVANPGQTPP FGEPEGVVCA ADVYSADPGT 60
LTSRLRRFGH DDGNWYFLCV ARWKDGNAGT RMSRAVRGGG TWHGSGKRVA VPRHGYRQTF 120
EYRDAAGDKS AWLMEEFGSS MPEATDGEGV RVICRVPPSK RQRATLSQEH GFAAADYWAA 180
AALAPPDAGC SYAIASTSQT AAPVNGAAST TTWQLQPMME QGVGYYHPTA GINGDEDIKG 240
VPEAEPLETV PADIGWQQFA EMGYGFGYAA EDARMNEWMR NTFSSCPQLI DAGA*
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