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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.7NG063000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
NAC |
Protein Properties |
Length: 211aa MW: 23800 Da PI: 7.2018 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7NG063000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 50.2 | 8.6e-16 | 46 | 189 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.... 77
lp+G+rF+P d l++ L ++++gk+ ++e+i+ ++ +++P++Lp vk + ++++fF++ +++y g++++ +
Pavir.7NG063000.1.p 46 LPAGVRFDPLDLKLLNLELLQHLQGKSslpnsnsrALIDEFIRYGgNVQYTHPRNLP-GVKMDGSSLHFFHTVSNTYGCGHHEQHKisns 134
799************99999999998887665443222235665568**********.6667889*************999888764566 PP
NAM 78 ....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ +W++ g++k +++++g ++g kk + + + Wvmh+y+l
Pavir.7NG063000.1.p 135 ddvsDEHIRWHKIGRSKVICEENGVEKGWKKGRGSSARSGGNVHGHCWVMHQYHL 189
665544778**********************9999877777878899******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MTWVGLVKRI RNATHLISLR LGEFIVDPYI NCPNCECGID TMWPALPAGV RFDPLDLKLL 60 NLELLQHLQG KSSLPNSNSR ALIDEFIRYG GNVQYTHPRN LPGVKMDGSS LHFFHTVSNT 120 YGCGHHEQHK ISNSDDVSDE HIRWHKIGRS KVICEENGVE KGWKKGRGSS ARSGGNVHGH 180 CWVMHQYHLG LDEDEMDGEF VISKLFYQLP *
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