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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.6NG053500.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 132aa MW: 14825.5 Da PI: 5.0965 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.6NG053500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 33 | 1.8e-10 | 7 | 115 | 10 | 127 |
NAM 10 tdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvka..eek.ew.yfFskrdkkyatgkrknratksgyWkatgkdkevl 93
td elv+ L+++ +g + + + + +++v i++++P+ L +++++ +++ + yfFs + + y+ Wk ++++l
Pavir.6NG053500.1.p 7 TDVELVD-ALARRRRGLPpPPSQPFtVHDVFIFDHDPSYLYTTYAGgaGSSgGCvYFFSDQFT-YQ-----------DGWKVAAGTQRIL 83
7999995.57777777774333333599999*********74222222222444488876543.43...........23**9999999*9 PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyr 127
+++g++vg k+tLvf++gr +t+W m+e+
Pavir.6NG053500.1.p 84 DAGGAVVGSKDTLVFHEGRWLP--RTRWAMDEFD 115
99**************999877..9*******97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 132 aa
Download sequence Send
to blast |
MQQQPVTDVE LVDALARRRR GLPPPPSQPF TVHDVFIFDH DPSYLYTTYA GGAGSSGGCV 60
YFFSDQFTYQ DGWKVAAGTQ RILDAGGAVV GSKDTLVFHE GRWLPRTRWA MDEFDAMYQE 120
GFKYSYNDLR L*
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