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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.5NG430200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 281aa MW: 29848.5 Da PI: 6.16 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG430200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 33.2 | 1.5e-10 | 10 | 137 | 5 | 127 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+r P +el++ +L+++v + ++ e+i+e+++y + P +L + ++++e+ wyfF++ + k + k+ ++ + W +d
Pavir.5NG430200.1.p 10 LRLAPLYSELIDSFLRPRVVSGENVG-EFIHEAGVYAAGPDQLTgQflpVTAGDEEAWYFFTTLKLKGDQ---KST-ASIAPWTPGREDG 94
6788999***********99999666.89**************84367555557779*****99887543...332.3345699888877 PP
NAM 91 evlsk...kgelvglkktLvfy...kgrapkgektdWvmheyr 127
+ + g ++ ++f + + ++++t+W m e r
Pavir.5NG430200.1.p 95 TSWGDripPKPRLGQRQNFAFVwkeDDKLVRSVRTRWSMVELR 137
7766445456669********965445667889******9976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
LPAQGAACAL RLAPLYSELI DSFLRPRVVS GENVGEFIHE AGVYAAGPDQ LTGQFLPVTA 60
GDEEAWYFFT TLKLKGDQKS TASIAPWTPG REDGTSWGDR IPPKPRLGQR QNFAFVWKED 120
DKLVRSVRTR WSMVELRRDS SDLLALCKVY RGVSDPKAKA DDGSHVAAMA GAPGRKEAED 180
EASAAAGVAA PGREEDDEID ADTAAGSTGR QKKAVGKSAG AAMTGKLCDG WRAPLDAAEK 240
AKKSPPAPFA SHPSDAALIN SYLRPWVVSG EKVGEFIHAG *
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