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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.5KG564200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
NAC |
Protein Properties |
Length: 306aa MW: 32454 Da PI: 4.5144 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.5KG564200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.8 | 2.8e-25 | 13 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89
lppGfrF Ptd+e++ +yL ++++g+++++ i e d +++ Pw L k ++++ + +fF+ + + +g r++r + g W+ +gk
Pavir.5KG564200.1.p 13 LPPGFRFVPTDQEVIAYYLLPRIRGQPIPF-GDILEDDPLSAPPWLLLGK-HGRRGDAFFFAAGKVMNGRGGRQERsCAGGGSWEGQGKR 100
79****************************.669999**********743.3445589******************778899*******9 PP
NAM 90 kevlsk..kgel..........vglkktLvfykgrapkgektdWvmheyrl 128
k + + + k L f++ ++ kg +t Wvmhey++
Pavir.5KG564200.1.p 101 KGAKGGngE--RqrvlvggeeiEWRKYALNFHE-EEVKG-STGWVMHEYSI 147
888876540..23445555554888999****5.55554.9********86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MEASASMASK LGLPPGFRFV PTDQEVIAYY LLPRIRGQPI PFGDILEDDP LSAPPWLLLG 60 KHGRRGDAFF FAAGKVMNGR GGRQERSCAG GGSWEGQGKR KGAKGGNGER QRVLVGGEEI 120 EWRKYALNFH EEEVKGSTGW VMHEYSITAP PSLAASLQRV YRIRLSGHGR NAQKRKRGEL 180 DWGSDEEEEE EYHAAARAPT LPAVAEAGAP FAGEYPPQPE PVGTLPVAAA AVDVGNGDPA 240 GWTEDGSSGA VSSAVSSADQ DLPALVDGGD DWNFMCSLSD LLPDFDFFPG AADAGETPSE 300 MVPAA*
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