 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.5KG004200.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
NAC |
Protein Properties |
Length: 207aa MW: 22080.8 Da PI: 7.2213 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.5KG004200.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 49.1 | 1.9e-15 | 12 | 104 | 1 | 90 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk....sgyWka 85
lpp ++F+Ptd ++v +yL +++ g++++ ++++ ++d +++ Pw+L ++ +a++++ +fF ++ k+ ++r++r++ g+W+
Pavir.5KG004200.1.p 12 LPPACKFDPTDADIVAYYLLPRAVGHSNPHAHAVIDADPCSCPPWELMrRHGHAGSDHAFFFGPTTKHG--SHRASRTVPagegGGTWHG 99
799********************999999989999************8334445666889999988765..4677776433344899**8 PP
NAM 86 tgkdk 90
+ +d+
Pavir.5KG004200.1.p 100 QTSDE 104
87765 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MEASRFGFDP SLPPACKFDP TDADIVAYYL LPRAVGHSNP HAHAVIDADP CSCPPWELMR 60 RHGHAGSDHA FFFGPTTKHG SHRASRTVPA GEGGGTWHGQ TSDETGLVLY MITDPLLPVP 120 GAVISRVRMD AKAKKKLQQP APAADNNGGF MGEAAGCKSA LVNTGEGGCL CSPQCWRDGC 180 YVNSSKVSFN EDTNYDRGQN RRLLPS*
|