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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.4NG078200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 512aa MW: 54720.6 Da PI: 5.0773 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.4NG078200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 60.9 | 4.1e-19 | 10 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atg 87
lp++f F P+de v +yL +++ g + +++ i e d +++ Pw+L + +++++e + ++ + + +g+r++r + g W+ +t
Pavir.4NG078200.1.p 10 LPACFVFAPEDEVAVEYYLLPRLLGWRPQIDGLILEDDPLSAPPWELL-ERNGRKEEAFLLAEGQARCGKGTRQKRtCAGGGWWEgqKTC 98
6899**************************999**************7.445677899999999************54556667632333 PP
NAM 88 kdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + l+ ++e+ + kk L f+ g + +t Wvmhey++
Pavir.4NG078200.1.p 99 AEGKGLRVpggggGTEAAWRKKALNFHGGGGGEKGSTGWVMHEYAV 144
33333333687877778**********99888888*********86 PP
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| 2 | NAM | 75 | 1.8e-23 | 181 | 314 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk. 88
lppGf F P+d ++v +yL +++ g++l+l+ i + d +++ Pw+L + ++ +++ +fF+ + ++ +g+r++r + g+W+ +
Pavir.4NG078200.1.p 181 LPPGFLFAPEDGDVVEQYLLRRILGQPLPLDGLILDDDPLSAPPWELLE-RNGCKDDAFFFALGQARSGKGSRQKRtCAGGGFWNGERTc 269
79****************************999**************73.34556799******************77789***954332 PP
NAM 89 .dkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
d e l+ + e+v+ kk L f +g ++ +t Wvmhey++
Pavir.4NG078200.1.p 270 vDGEKLRVavpggaGAEVVWRKKALSFQEGGEKG--STGWVMHEYAI 314
233332224568877788*********9887766..8********86 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 512 aa
Download sequence Send
to blast |
MEAALRMGEL PACFVFAPED EVAVEYYLLP RLLGWRPQID GLILEDDPLS APPWELLERN 60
GRKEEAFLLA EGQARCGKGT RQKRTCAGGG WWEGQKTCAE GKGLRVPGGG GGTEAAWRKK 120
ALNFHGGGGG EKGSTGWVMH EYAVTAPEDL ARSPLRLYHI RRSSYGRKQS GAMEVPRALG 180
LPPGFLFAPE DGDVVEQYLL RRILGQPLPL DGLILDDDPL SAPPWELLER NGCKDDAFFF 240
ALGQARSGKG SRQKRTCAGG GFWNGERTCV DGEKLRVAVP GGAGAEVVWR KKALSFQEGG 300
EKGSTGWVMH EYAITAPDHL AASQMRLYRI RFSGHGKKRK RGEADSLADE AAQAAARRRV 360
ADDPLLDIST SQPSCSSSTV MVDHAYGNCP TDAGQLAAPV SISANQDLNP GGITVDTSLD 420
LSFLDNFDLD EFMRSLGDLP STDPCVLSAV TEMGAYLDAD AVGSSFFDQT GSPCNGVGAG 480
QVAMASSTLH RGCMEPADSF IAGLNQSYAA C*
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