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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.4NG018000.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 215aa MW: 22976.3 Da PI: 12.0886 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.4NG018000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 34.4 | 6.5e-11 | 51 | 132 | 2 | 95 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
GfrF Ptde lvv+yL++++ +++l++ d+ ++ P + +eke yfF+++++ky +g ++ t +g+ + tgk+k
Pavir.4NG018000.1.p 51 LSGFRFWPTDEVLVVHYLRRRTLASPLPA------HDLSDLlPPGEW------SEKERYFFTCKETKYVKGGART-GTGTGRPRGTGKEK 127
68************************888......344444145555......5789***********9976544.47899********* PP
NAM 91 evlsk 95
+v ++
Pavir.4NG018000.1.p 128 PVAVA 132
99875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MAGHLLLRLA SPASPGTPHR RHLLRLAADP LPPHRRSHRP RELAMAKPRL LSGFRFWPTD 60
EVLVVHYLRR RTLASPLPAH DLSDLLPPGE WSEKERYFFT CKETKYVKGG ARTGTGTGRP 120
RGTGKEKPVA VAVPARGGGQ AQAQRGHAGV HRLRTRGRGR GGAARAAAGA ATARVVAGGV 180
VEPPDGHVAR AARAGAGVAD EWAPPYLTEI ANRR*
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