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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3NG006200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
NAC |
| Protein Properties |
Length: 250aa MW: 26956.7 Da PI: 7.3703 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3NG006200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 54 | 5.5e-17 | 12 | 128 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklelee..vikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgk 88
+GfrF+Pt e ++yL + v+g +l+++ vi+++ +y +eP dL ++++ ++ + +fF++ +k +r + g+W +
Pavir.3NG006200.1.p 12 RGFRFNPTPLEAATYYLPRLVAGAPLHEAVrpVIHHAAVYACEPADLARQFRPmpRTGHRFFFTSCRKG------VRR-AGPGFWTLQRM 94
7************************55532226**************8644442244477999888764......355.577***98866 PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
+ +++ kg++vg k L + ++g tdW+m+ey+
Pavir.3NG006200.1.p 95 -TVIMDGKGAKVGEIKKLRYK----KRGAYTDWLMDEYS 128
.67888899**********97....78889********8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MAPLLGAEIF SRGFRFNPTP LEAATYYLPR LVAGAPLHEA VRPVIHHAAV YACEPADLAR 60
QFRPMPRTGH RFFFTSCRKG VRRAGPGFWT LQRMTVIMDG KGAKVGEIKK LRYKKRGAYT 120
DWLMDEYSTC CSEDAVVGDR QYVFCNIYVS PKAAPDSAAR QESAAFLAPP STAPAPPAPV 180
VIAQAPPLKR PAPQAAEPPC PKRTRGAVFA ASDLPSEESP AADQDDELVE STEGIVPTAE 240
AEEAAANSE*
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