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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.3KG118200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB_related |
Protein Properties |
Length: 343aa MW: 38398 Da PI: 8.005 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3KG118200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 22.8 | 2.1e-07 | 162 | 224 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHT......TTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmg......kgRtlkqcksrwqk 46
r+ W++eE +lv a ++ Wk + r+ + +Rt qcks+w+k
Pavir.3KG118200.1.p 162 RKYWSEEENIRLVSAWLNNSNDpvkgndkkfyhYWKEVTREYNkyspkdRRRTVPQCKSHWNK 224
678***********************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MEPSSSSASF TSLNNPSSTP DFPPVQSGYS QQYHSFPPPY FPPHIPPPPY ATNQQPHYAH 60 NFNPYVAPPG YQQFHPGSSS YPCFPYQGGV GQQQQEPSGV GMASDPSSPV GSTFFFGGTG 120 GGGSRGDESA SPVSIPQPVQ GGPVIEEECD SSPEEGKKNP GRKYWSEEEN IRLVSAWLNN 180 SNDPVKGNDK KFYHYWKEVT REYNKYSPKD RRRTVPQCKS HWNKNAPKVT KFNSCWHRMK 240 SAHGSGESDE QILERAHAVY KSENKQKPFL FEYWWRVIKD QPKWARVYPL ENKRLKLNAS 300 GAYTSSSNQD TDEASAPANP RPHEGTYQEQ SLKETANYVH NA*
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