 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2NG372000.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
NAC |
Protein Properties |
Length: 716aa MW: 78114.9 Da PI: 4.4818 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG372000.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 146.9 | 1e-45 | 10 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
ppGfrF+Ptdeelv ++Lk+++ + + + +++vd+yk++P++Lp+ ++++++++w+fFs+ d+ky++g+r++r+t +gyWkatgkd
Pavir.2NG372000.1.p 10 PPGFRFSPTDEELVLYFLKRRIVSGRPSP--YVADVDVYKSHPSHLPErsALQTGDRQWFFFSRMDRKYPNGSRASRTTGDGYWKATGKD 97
8********************88888555..69*************94357888999********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++ +g++vg kktLv+++grap+ge+tdWvmhey+l
Pavir.2NG372000.1.p 98 RFICGGGGRAVGNKKTLVYHHGRAPRGERTDWVMHEYTL 136
*************************************87 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070301 | Biological Process | cellular response to hydrogen peroxide |
GO:0005634 | Cellular Component | nucleus |
GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 716 aa
Download sequence Send
to blast |
MEAPPPRRWP PGFRFSPTDE ELVLYFLKRR IVSGRPSPYV ADVDVYKSHP SHLPERSALQ 60 TGDRQWFFFS RMDRKYPNGS RASRTTGDGY WKATGKDRFI CGGGGRAVGN KKTLVYHHGR 120 APRGERTDWV MHEYTLLADA LPPAAQGRES YALYKLFQKS GAGPKNGEQY GAPFREEDWL 180 DDEEGVIAVA PASPVPNNNN CPATVEEHEI ADRELPVEDL DELLSQIGND KEEFGEAQLD 240 FSTPATSHGQ SQGWLSEGGN KAEVVDASIS SGAGVAAENT CTGGLPLGDI EQLLMQMSDD 300 QQNAELFSDL STSVPQLQLQ CDDHQVWLDA HREQEVCAPD PTTSSGVVVT AECTDTEFGD 360 LEGLLLQIAN DQDMIEPQSD LSGPIPYHNF NQVGIGDFHE SHGALVGNLS CIVQESTFDP 420 QTEPRSQFPQ SSLTNVPFSG ETNSSEGTSV PRSVSGLISY NSQDADEEFL EINDFFDLEG 480 VEQSANCTAT EHLISATNGM FDNLEYSDAH TFLPGPFDTV GVVAENQFFD YGNTGIQDQG 540 YQYTTEVTTH NQAALNVRSH MKHTHVVLPS HASGTLNLHA ANEPPNRSST ASQSWFNAAL 600 SALLDSVPSS PALAAEIENT VINKTLQRIS SFRSHQASGE DNTVINRTLH RISSFRSQQV 660 ASEQPSTPTI QVTRGGRLMF LSLLVILAAV MWTFTAGSAG SALNFCKGLW KSSSR*
|