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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.2NG320400.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
TCP |
| Protein Properties |
Length: 265aa MW: 28385.2 Da PI: 6.7062 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.2NG320400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 113 | 4.2e-35 | 100 | 178 | 3 | 83 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssas 83
++drhski T++g RdRR+Rls+++a+ fF+Lqd+LGfdk+skt++WLl+q+kpai+ lt+ s+++c + s+
Pavir.2NG320400.1.p 100 FRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDRLGFDKASKTVDWLLTQSKPAIDRLTEP---SHQRCvggG--DAALSSP 178
689**********************************************************99...444555331..2222222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MLPYPNSHHF GVSHSQKQQP HPNPTGFPMM PPAAHLDQHY ADHHFFPGHG QFNSETLEAV 60
LRPPRAAPES GPAVTAPPQG GRNGAAAAGQ GHARARNRPF RTDRHSKIRT AQGVRDRRMR 120
LSLDVARDFF ALQDRLGFDK ASKTVDWLLT QSKPAIDRLT EPSHQRCVGG GDAALSSPTS 180
GAPNGSGNKS SRGGVVEKAG TRNGGSAAFL EHGCELDRLV SAAPALGEYY YAGLSEMMSN 240
NGGEGDDEGE YEEDGDDFLD GMQY*
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