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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2KG108200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB_related |
Protein Properties |
Length: 351aa MW: 38842.9 Da PI: 7.8965 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2KG108200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 296 | 344 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46
r++W++ E++ l+++v+++G+g Wk I + + R+ ++k+++++
Pavir.2KG108200.1.p 296 RKKWSEIEEKTLLEGVEKYGKGYWKDIKMAYPnvfEERSTVDLKDKFRN 344
789********************************99**********99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MPHLAAADAF LILEFIAGNR RTPHGILAAL LALLPSSFSP RTSPRLRKAL VLRTLHAALH 60 AEDASCSFTL LGKARRVLAD PNASACFPNQ LSFADNQEDD GARAAAAVAD LKRFLDHEWA 120 NLPPSMLELA ADRLAGHRSL QTWAAADHAN RTKLRLLVGE STEREILAKL MQDASASHPP 180 ILPEVSDNAN DANEADGAQQ NHAAYHSKQS NEADRAQEGM AAHQNVSMKG AQGVQLPEKS 240 VPASNKPSLM ERHPNASIFE WNGLGDYDED RLVGKRKLPP FVRKPHPSPA FAHKMRKKWS 300 EIEEKTLLEG VEKYGKGYWK DIKMAYPNVF EERSTVDLKD KFRNMERHHE *
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