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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.1KG079200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB_related |
Protein Properties |
Length: 414aa MW: 45972.9 Da PI: 7.7854 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.1KG079200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 23.9 | 9.4e-08 | 164 | 227 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHT......TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmg......kgRtlkqcksrwqky 47
r+ WT+ ++e+lv+a ++ + W I+ t + +Rt+kq+k++w +y
Pavir.1KG079200.1.p 164 RNEWTPADEEKLVNAWLMHSVDcvdgnsksgptFWGQISDTYNattdplRHRTAKQLKDHWSMY 227
789**********************************************************887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MANWSPNMQS YFDLLNADPE RSTTHTPGTN ASEEEFDYSP LHRRSETAPP SQPRALFPPA 60 PGAFVGAPPP YPYPSYPYPP YPYPPAPATS RVAPPPYPYP APMTDAPPPY PYPPYPYPPY 120 PYPPPPTFTT SAPHGHAGGA ASAGSENEGG GTTAPCRPAI PKKRNEWTPA DEEKLVNAWL 180 MHSVDCVDGN SKSGPTFWGQ ISDTYNATTD PLRHRTAKQL KDHWSMYNAR VSLFNAIYNQ 240 EVSKRQSGAD DDMVMDEAKA RYARRAGHEF KLFHWWEAVR HQPKWSVKHG GGPNIDVSKR 300 SRLGTSGEYS SGSRETDEEV NRPPGRDRSK AAARKGKGKV SSSSHTSTDS AEMGEKLEDL 360 CKITHEYAQA KLWKQWNILS SRSTDGMTDA QKKVHDRALK RLQQQLHLND DDE*
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