PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.G00755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 380aa MW: 40178.7 Da PI: 6.2734 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 179 | 237 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv +L++e ++L +l +l+ l+se+ Pahal.G00755.1 179 KRAKRILANRQSAARSKERKMRYIAELERKVHNLQSEATTLSAQLAMLQRDTTGLTSEN 237 9***********************************************99999888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-17 | 175 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.036 | 177 | 240 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-9 | 179 | 234 | No hit | No description |
Pfam | PF00170 | 1.7E-8 | 179 | 237 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-11 | 179 | 234 | No hit | No description |
CDD | cd14703 | 2.26E-24 | 180 | 229 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MDPAPPVDPA ASCSASTSSS ASAAAPGDVA AMLPDSPPRR GAGHRRAQSE ILLGGAALPD 60 DLTFDADLGV VGEACGAGDE DEDDDYEDED GGAGAGGSRM FEMFLQNGGT LPGPPEPSAH 120 PHPAATPPPR PRHQHSMSMD GSTSLLGSAT AGTPGRAGAD AKKAISDAKL AELALVDPKR 180 AKRILANRQS AARSKERKMR YIAELERKVH NLQSEATTLS AQLAMLQRDT TGLTSENSDL 240 KIRVQTMEQQ LRLQDALNDR LRDEIQQLKI ATGQVNANIG KIGNFGLSSF GGNPQSFQRS 300 HIQSLLAAQQ LQQLQIHSQH QQQQQTHLQQ QQHLSTALQH QLLQEALPFP GDLKMKGLAM 360 PSHGQNAGAS DSHAVKSEP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025825794.1 | 0.0 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 6e-88 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A2S3I806 | 0.0 | A0A2S3I806_9POAL; Uncharacterized protein | ||||
STRING | GRMZM2G112483_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 4e-63 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.G00755.1 |
Publications ? help Back to Top | |||
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