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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C02822.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB_related |
Protein Properties |
Length: 189aa MW: 20682.9 Da PI: 9.4111 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C02822.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.2 | 1e-14 | 120 | 164 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++++ +++G g+W+ I+r k+Rt+ q+ s+ qky
Pahal.C02822.1 120 PWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKY 164
8*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MAFYYGVSGQ SSSAAAAWAA PPSSRPWSKA EDKVFEGALV TFPEHVPNRW TLVASRLPGR 60 TAQEAWDHYQ ALLTDVDLIE RGMVEAPDSW DEDAAAGGGR AGAGRGRGAG GGEERRRGVP 120 WTEEEHRLFL EGLEKYGRGD WRNISRWSVK TRTPTQVASH AQKYFIRQAS AGSRGDSKRK 180 SIHDITTP*
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU971405 | 1e-171 | EU971405.1 Zea mays clone 363908 DNA binding protein mRNA, complete cds. |