PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK23050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 19125.6 Da PI: 9.9451 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83 | 6e-26 | 2 | 124 | 4 | 127 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 G+ F+Pt++e++ ++L+ k+ g + + + i e+ d++k+ePw+L + k+++ +e+ew+f ++ ++++++ +nr+tk+g+Wk tg+ ke+ + PK23050.1 2 GLTFNPTEQEVI-NHLELKTLGMNSKYDLYIVEIdDMLKFEPWELSAklKLNStKENEWWFLYRSFYRSSSSQCRNRKTKTGFWKVTGRGKEIEN----S 96 99**********.99********9999667999989*********852433333677**99999999999999********************88....7 PP NAM 100 vglkktLvfykgrapkgektdWvmheyr 127 g k L+fykg+++++++t +m+e+ PK23050.1 97 LGEKSYLTFYKGSSKSSQRTGYTMQEFF 124 9*************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 27.915 | 1 | 146 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.1E-25 | 2 | 137 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-11 | 2 | 123 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MGLTFNPTEQ EVINHLELKT LGMNSKYDLY IVEIDDMLKF EPWELSAKLK LNSTKENEWW 60 FLYRSFYRSS SSQCRNRKTK TGFWKVTGRG KEIENSLGEK SYLTFYKGSS KSSQRTGYTM 120 QEFFIPPLHH LHQDEFILVI CSLKWDSRKR GRKSDKQKPT X |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18500 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33280.1 | 2e-21 | NAC domain containing protein 15 |