PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK13754.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 468aa    MW: 51303.4 Da    PI: 8.2517
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK13754.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10183223545
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  PK13754.1 183 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 223
                788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-9179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415181225IPR004827Basic-leucine zipper domain
PfamPF001702.8E-7183223IPR004827Basic-leucine zipper domain
CDDcd147086.08E-22183235No hitNo description
SuperFamilySSF579597.5E-7183226No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-7184227No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141447.9E-31265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGSRTVKIGA HDGNKVVNEM PSYVPPISSP NPIGTEGSTT RSSRISDFGT LEQSLGFRLE  60
DAVDIGRNPV FNQLKSGSSA LGNDVQFDVL SKSLALSDAN LSAAIVGSQP LSLPKDSQTK  120
LASLSGSHRE NWGESSMAEG SPRTDTSTDD TDDKNQRHER NQLLGVGASD SSDKSKEKAG  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELQRARQQG IFISSSGDQS  240
HSMSGNGALA FDVEYARWLE EHNRQINELR AAVNSHAGDG ELRTIIENVT THFDDIFRLK  300
GIAAKADVFH ILSGMWKTPA ERCFMWIGGF RSSELLKLLV SQLEPLTEQQ LMGICNLQQS  360
SQQAEDALSQ GMEALQQSLA ETLANGSPGP SGASGNVANY MGQMAMAMGK LGTLEGFLRQ  420
ADNLRQQTLQ QMHRILTTRQ SARALLAIND YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019565.10.0transcription factor HBP-1b(c38)
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2P5BIP10.0A0A2P5BIP1_TREOI; Basic-leucine zipper transcription factor
STRINGEMJ050740.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-134bZIP family protein