PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK09021.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 244aa MW: 27750.3 Da PI: 9.131 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.3 | 4.4e-10 | 45 | 87 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 + k rr+++NReAAr+sR+RKka++++Le +L++ ++L PK09021.2 45 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 87 568899************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.2E-8 | 37 | 90 | No hit | No description |
Pfam | PF07716 | 2.6E-7 | 43 | 89 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 9.8E-8 | 43 | 106 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 45 | 89 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 2.54E-24 | 47 | 99 | No hit | No description |
SuperFamily | SSF57959 | 2.75E-7 | 47 | 90 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.5E-30 | 129 | 202 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MADASPRTDI STDVDTDEKN QMFDRGQYGL MAASDSSDRS KDKSDQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQAHSMSGN GAMAFDVEYG 120 RWLEEQNRQI NELRSAVNSH AGDTELRIIN DGILAHYDEI FRLKGVAAKT DVFHLLSGMW 180 KTPAERCFLW LGGFRSSELL KVKFPQTRTL VLNIFPNQHI GSFPKLECIM SSYTSIEGFS 240 CLFK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP462877 | 0.0 | KP462877.1 Boehmeria nivea bZIP3 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015894780.1 | 1e-135 | transcription factor TGA2.2-like isoform X2 | ||||
Refseq | XP_024934309.1 | 1e-135 | transcription factor TGA2.2-like isoform X1 | ||||
Swissprot | Q39140 | 1e-116 | TGA6_ARATH; Transcription factor TGA6 | ||||
TrEMBL | A0A0H3W7L5 | 1e-136 | A0A0H3W7L5_BOENI; BZIP3 | ||||
STRING | XP_010095986.1 | 1e-133 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1470 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 9e-99 | TGACG motif-binding factor 6 |