PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PEQU_30721 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 341aa MW: 38416.1 Da PI: 6.4454 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.9 | 2.5e-09 | 151 | 206 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 kr++r NR +A rs +RK +i+eLe+kvk L++e +++ +l l+ l PEQU_30721 151 KRAKRIWANRQSAARSKERKMRYIAELERKVKLLQTEATTMSAQLTILRRDTNGLS 206 9****************************************999988877666555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-13 | 147 | 211 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.496 | 149 | 212 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.69E-10 | 151 | 202 | No hit | No description |
Pfam | PF00170 | 2.2E-8 | 151 | 201 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-7 | 151 | 205 | No hit | No description |
CDD | cd14703 | 1.03E-21 | 152 | 201 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 341 aa Download sequence Send to blast |
MPDFPTRTIS HRRSWSEVLS LPDDISFDGD LGVVGGMDSP SLFDDTEDDL FSMYIDLEKF 60 NKSAGTAGEV LEVDDPSGTA TPPVPLQQTE NQESSLNDKP KFRHQHSYSM DGSSSVKSEL 120 LPSGLEIPTD AETKKAMSAA KLADLALVDP KRAKRIWANR QSAARSKERK MRYIAELERK 180 VKLLQTEATT MSAQLTILRR DTNGLSAENS ELKLRLQTIE QQVHLQDALN DAMREEVQLL 240 KLATGQITPN ASMMNFRPSL GTNQQFYDHN QAMQSLIAAH QIKQLQIRSQ HQQQLLPHQH 300 QHQQQQPLPA EVKVKGTMAS QNPRDAIYDT NNTHKERWNL P |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020587318.1 | 0.0 | probable transcription factor PosF21, partial | ||||
Swissprot | Q04088 | 1e-112 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A2I0VSU5 | 1e-180 | A0A2I0VSU5_9ASPA; Putative transcription factor PosF21 | ||||
STRING | GSMUA_AchrUn_randomP00680_001 | 1e-132 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4269 | 38 | 68 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-117 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|