PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_26966 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 221aa MW: 24561.3 Da PI: 10.447 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.2 | 1.1e-15 | 149 | 204 | 2 | 57 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 k+++ +r++kNRe+A rsR+RK+a++ eLe +v++ +eN +Lkk++eel+k +a PEQU_26966 149 KDDRHLKRMMKNRESAARSRARKQAYTNELELEVANRAEENARLKKQNEELRKAIA 204 678999***********************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-14 | 144 | 203 | No hit | No description |
SMART | SM00338 | 6.4E-11 | 148 | 215 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-12 | 149 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.093 | 150 | 201 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 8.33E-22 | 152 | 206 | No hit | No description |
SuperFamily | SSF57959 | 1.63E-10 | 152 | 203 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 155 | 170 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MATPTPKSKP DSPPPLHPSP ALLLLFLLLP SPPSPVPPAP KRKSMEEVWK HIDLSTLAHE 60 SQPPTTVCSD QHHFNMRRMI LQDFLASAFE SQPRSPVANE LPQFPLPPTA LSLSNGMGGP 120 IAPLKLPLHA ATSMSAKKHP LDDVCSNSKD DRHLKRMMKN RESAARSRAR KQAYTNELEL 180 EVANRAEENA RLKKQNEELR KAIAAQIPKK DFLQRTSSAP F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ609180 | 0.0 | KJ609180.1 Phalaenopsis aphrodite subsp. formosana FD protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020581953.1 | 1e-135 | LOW QUALITY PROTEIN: protein FD-like | ||||
TrEMBL | A0A0N7AL13 | 1e-126 | A0A0N7AL13_PHAAO; FD protein | ||||
STRING | XP_009802867.1 | 4e-39 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-32 | bZIP family protein |