PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_22447

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 357aa MW: 40969.5 Da PI: 8.9782

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_22447	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.7	9.9e-32	91	144	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ PEQU_22447 91 PRLRWTPELHLSFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 144 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.999	87	147	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	9.3E-30	87	145	IPR009057	Homeodomain-like
SuperFamily	SSF46689	7.35E-15	89	145	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.8E-22	91	146	IPR006447	Myb domain, plants
Pfam	PF00249	1.1E-9	92	143	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence Send to blast
MDEEKGKEVV EIYEETAKHR RPAKSLDLNE EVDDEKGSKE DEDKGSTSEV MGGREVYCSE 60 HGSSEDGEGD GGRRGERSGS TVRQYVRSKM PRLRWTPELH LSFVHAVERL GGQERATPKL 120 VLQMMNVRGL SIAHVKSHLQ MYRSKKLDDS GQERSNISTA LSPFHAHLRR DRFHEMYYQR 180 PGSYQPFKME RGSLFRSGNI HEADWFYKVL QKSQSQTPLS DFKNTSFRNH EWVFNQHMAA 240 KSNSIKDQQG HTNGLINDMK FNKEGKPSTS HLYDVRDVFS ANEISRKPQK LQEERQWQLG 300 RSTVFEHSIN SSISNSSFGK RVINCSINQS SLRDPSSIKS GYETQKIQSP IHQAEVC

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence Send to blast

MDEEKGKEVV EIYEETAKHR RPAKSLDLNE EVDDEKGSKE DEDKGSTSEV MGGREVYCSE  60
HGSSEDGEGD GGRRGERSGS TVRQYVRSKM PRLRWTPELH LSFVHAVERL GGQERATPKL  120
VLQMMNVRGL SIAHVKSHLQ MYRSKKLDDS GQERSNISTA LSPFHAHLRR DRFHEMYYQR  180
PGSYQPFKME RGSLFRSGNI HEADWFYKVL QKSQSQTPLS DFKNTSFRNH EWVFNQHMAA  240
KSNSIKDQQG HTNGLINDMK FNKEGKPSTS HLYDVRDVFS ANEISRKPQK LQEERQWQLG  300
RSTVFEHSIN SSISNSSFGK RVINCSINQS SLRDPSSIKS GYETQKIQSP IHQAEVC

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	3e-17	92	146	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-17	92	146	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-17	92	146	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-17	92	146	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592198.1	0.0	uncharacterized protein LOC110032783
TrEMBL	A0A2I0VHV8	1e-176	A0A2I0VHV8_9ASPA; Myb family transcription factor
STRING	GSMUA_Achr10P14250_001	1e-83	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-37	G2-like family protein