PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_18946 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 20564.1 Da PI: 6.2772 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.5 | 1.6e-09 | 141 | 177 | 13 | 49 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 NR +A rs +RK +i eLe+kv++L++e ++L +l PEQU_18946 141 NRQSAARSKERKARYISELEKKVQTLQTEATTLSAQL 177 ********************************99766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 1.0E-9 | 137 | 181 | No hit | No description |
CDD | cd14703 | 1.05E-20 | 138 | 181 | No hit | No description |
Pfam | PF00170 | 7.7E-8 | 140 | 177 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-10 | 140 | 181 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MHRRSRSEFI LRFPDEFGLN SGEAMATGSF EEIGSEDDLF STYMDIEKIG CKLEGSGSGS 60 EDGVGRDRVA ESSGGGQELR TDNAGNGGAA SMLKTKHRHS NSVDGSSVSF AYLSLLVGFV 120 LMICFFRGII AYTALEAILA NRQSAARSKE RKARYISELE KKVQTLQTEA TTLSAQLTFY 180 QVSIKFFL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020577063.1 | 1e-115 | transcription factor RF2b-like | ||||
TrEMBL | A0A2I0WTB0 | 2e-76 | A0A2I0WTB0_9ASPA; Transcription factor RF2b | ||||
STRING | XP_008808308.1 | 2e-51 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP17792 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 4e-37 | bZIP family protein |