PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_14966 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | C2H2 | ||||||||
Protein Properties | Length: 200aa MW: 22473.6 Da PI: 7.8785 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00032 | 95 | 113 | 1 | 19 |
EEETTTTEEESSHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrH 19 +kC dC++sFs++ L H PEQU_14966 95 HKCRDCNMSFSSHKALGGH 113 79**********9998666 PP | |||||||
2 | zf-C2H2 | 13 | 0.00032 | 148 | 170 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC dC+ Fs+ L H+r+H PEQU_14966 148 HKCYDCSSEFSSGQALGEHMRKH 170 79********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 1.9E-5 | 94 | 119 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 5.35E-5 | 94 | 170 | No hit | No description |
SMART | SM00355 | 55 | 95 | 115 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.265 | 148 | 170 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.31 | 148 | 170 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 3.7E-7 | 148 | 172 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 150 | 170 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MEESTIMKEK RTKQQRHHLL PHVISPILSP TTLLEISESP TEEEEEMANC LIFLAKGGYK 60 PKLNEIEEAT TAVNLTGRVT EPTTTATGKT ENNVHKCRDC NMSFSSHKAL GGHRASYNKK 120 LKLSIPLASK VLNEFPFTSS VMIKVKSHKC YDCSSEFSSG QALGEHMRKH RQLITPEQTK 180 KEDNSKAFYL DLNLPPPCDD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020592809.1 | 1e-148 | zinc finger protein ZAT5-like | ||||
STRING | XP_008787454.1 | 3e-37 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2013 | 32 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 2e-18 | C2H2 family protein |