PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10754
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family CAMTA
Protein Properties Length: 966aa    MW: 108300 Da    PI: 6.6725
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10754genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1171.11.6e-5381213116
        CG-1   3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101
                 + k+rwl++ ei++iL+n++++++t +++  p+ gsl L++rk +ryfrkDG++w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrrcywl
  PEQU_10754   8 EAKNRWLRPGEICEILHNYHNFNITPDPPYLPSGGSLYLFDRKALRYFRKDGHHWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRCYWL 106
                 5699*********************************************************************************************** PP

        CG-1 102 Leeelekivlvhyle 116
                 L+ ++e+ivlvhy++
  PEQU_10754 107 LDGKYEHIVLVHYRD 121
                 *************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.8012128IPR005559CG-1 DNA-binding domain
SMARTSM010762.5E-715123IPR005559CG-1 DNA-binding domain
PfamPF038597.2E-488121IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.3E-7424514IPR013783Immunoglobulin-like fold
CDDcd001021.33E-4426513No hitNo description
PfamPF018331.2E-5427511IPR002909IPT domain
SuperFamilySSF812961.43E-17427512IPR014756Immunoglobulin E-set
CDDcd002041.70E-16613722No hitNo description
SuperFamilySSF484032.64E-18614725IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.0E-18624726IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.245630734IPR020683Ankyrin repeat-containing domain
PfamPF127966.0E-7635727IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.033663695IPR002110Ankyrin repeat
SMARTSM002483.9E-4663692IPR002110Ankyrin repeat
SMARTSM00248490702731IPR002110Ankyrin repeat
SuperFamilySSF525401.01E-8831888IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000152.9837859IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.261838867IPR000048IQ motif, EF-hand binding site
PfamPF006120.0039839858IPR000048IQ motif, EF-hand binding site
SMARTSM000155.1E-4860882IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.413861885IPR000048IQ motif, EF-hand binding site
PfamPF006127.0E-5864882IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 966 aa     Download sequence    Send to blast
DMQQILFEAK NRWLRPGEIC EILHNYHNFN ITPDPPYLPS GGSLYLFDRK ALRYFRKDGH  60
HWRKKKDGKT VREAHEKLKA GSVDVLHCYY AHGEDNENFQ RRCYWLLDGK YEHIVLVHYR  120
DLSEDTSSNV PQLLGSDLTF QSAQTIPIAG SAPINSFALA KPASQSSSTS NLDWNIQPAS  180
SEFEVADSGD FLSEIPLAVS VPGSGFQVES LTRNSITVPI TVRGSIFHPY TTSSMNCVSL  240
SGPVNPSFLN QVTSQNLILN SGQNVLETSP SAGSFGFQFN NDNSASALSE FYDSEQNLTD  300
TEEHKLLFQP QCCVDAVDSR TRDSVAQNDD RIMSGLHDEV VPSVSSLGTY LYDDDPVDLD  360
KFDSIERWMN KELGSDCYNS LIASDSCTYW NAINSQHDKV FSSMSRHIQL DVDLVAPSLS  420
QVQLFSIDDF SPNWAYAGAE TKVLISGAFL GGIQPSNIKW CCMFGEVEVL AEVLMTNAIR  480
CLAPPHSPGR VPFYITCSNR LACSEVREFE YRENPPNMQQ MLIDDEPVSE DEIFLQIQFA  540
KMLSIGSDEK RLLCSIKNCA KCIITKVLAQ MLIDDEPGWE KIEKETKACQ GYLRNLRNGL  600
LEKLLKGKLY EWLVCKLHED DKGPNILDDK GQGAIHLAAA LGYEWAMAPI FAAGVNPNFR  660
DLHGRTALHW AAHYGREQTI VTLLKLGASP GAIEDPTSKF PVGQTAADLA SSRGHKGIAA  720
YLAEADLTSH LNSMSIAENV MGSVSASLAA EEAVENVEEE NIFSSVVETG QISLRESLAA  780
VRNSAQAAAR IYAAFRAQSF RHRQLTRNTE HADNACEVLL HSSPNNNVHK IGRFNEYLHA  840
SAIKIQQKYR GWKRRKEFLK IRNRIVKIQA HVRGHQVRKQ YKQFVWSVGI VEKAILRWRR  900
KRSGLRGFRA ENAIRGGADP AVDKVDEYDF LHVGRKQKAA CLEKALQRVK SMVLYPEARE  960
QYRRLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583064.10.0calmodulin-binding transcription activator 3-like isoform X3
TrEMBLA0A1D1Z0140.0A0A1D1Z014_9ARAE; Calmodulin-binding transcription activator 1
STRINGXP_010270930.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1