PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08214
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 356aa    MW: 39209.4 Da    PI: 5.6732
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08214genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011103125123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C k+F+++  L  H  +H
  PEQU_08214 103 FPCGWCEKVFPSHQALGGHRASH 125
                 89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.16E-7101125No hitNo description
PROSITE profilePS501579.037103130IPR007087Zinc finger, C2H2
SMARTSM003550.075103125IPR015880Zinc finger, C2H2-like
PfamPF139127.2E-8103127IPR007087Zinc finger, C2H2
PROSITE patternPS000280105125IPR007087Zinc finger, C2H2
SuperFamilySSF576671.16E-7179206No hitNo description
Gene3DG3DSA:3.30.160.608.5E-4182207IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139126.6E-11183208IPR007087Zinc finger, C2H2
SMARTSM003550.35184206IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.429184211IPR007087Zinc finger, C2H2
PROSITE patternPS000280186206IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MRAHGINYQH ISDAEENPND HVHHQQQSPT SHSNTAEEED VAHCLVMLSS ATVGRVLLIG  60
NGERASTFSR KEDVNDEEIL PLPLVATISR GPNLNPTLPR RTFPCGWCEK VFPSHQALGG  120
HRASHKKVKG CFAAKLGIKS PDDTKAYIED DNRNANHQNN MIESFVLAEN WPRQFPKKKN  180
PKAHVCLECN RQFSSGQALG GHKRSHSAAA AAAAATVNPM FAATATTDME VATSSSITNV  240
MQPHTLNLLR MFSDSTSIID LNMPVPTDNI TESPPQSGWE MNQTRKNQRA ATTSDNDDEK  300
EKAPMENLEE EVESKEVNMA NPSDLMVDTD EEDGSSEWLQ IGFGSMFHKQ SGADRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572580.10.0zinc finger protein ZAT5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35243262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.14e-18C2H2 family protein