PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_07750

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 483aa MW: 53723.2 Da PI: 6.1519

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_07750	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.5e-10	173	211	4	42
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 k rr+++NReAAr+sR+RKka++++Le +L + PEQU_07750 173 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLAQLE 211 6889*************************8666665554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-5	170	246	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.197	172	216	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-7	173	214	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.31E-6	174	212	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.9E-7	175	217	No hit	No description
PROSITE pattern	PS00036	0	177	192	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.3E-30	254	329	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence Send to blast
MSDHRVGETG LSNSGPSSQP LAYGLHGFSP TATNFFDQEG AAYFEELEEA LMQGVVGIRG 60 DGNTKTYLTT RPPTLEIFPS WPMRFHPNAV GNSQSAESSD SGSAQNTISQ LESESPVSRK 120 DDYPELFTEK QQQQQMIPSD GSKAEIGTAE NHQSRDQGKR RLTAEKDGKN LDAKTLRRLA 180 QNREAARKSR LRKKAYVQQL ESSRMKLAQL EQDLERARSQ GLLLPGASTN GGISSGAVMF 240 DMEYAQWLDE NYKHMAELQG GLQSHLPDNN LRVLVDECLK HYDEIFRLKT IAVKSDVFHL 300 ITGMWTTPAE RCFLWVGGFR PSDLLKILMP HVDPLTEQQL VGICNLQQSS QQAEEALSQG 360 LEQLQQSLAD TVASGSLSED LNVGNYMGYM AMALGKIGSL EGFVRQADNL RQQTLHQLRR 420 ILTIRQAARC FLAIGEYNNR LRALSSLWSS RPRENSIANE NGFPASTNLQ ILQPAVDAHF 480 SVF

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence Send to blast

MSDHRVGETG LSNSGPSSQP LAYGLHGFSP TATNFFDQEG AAYFEELEEA LMQGVVGIRG  60
DGNTKTYLTT RPPTLEIFPS WPMRFHPNAV GNSQSAESSD SGSAQNTISQ LESESPVSRK  120
DDYPELFTEK QQQQQMIPSD GSKAEIGTAE NHQSRDQGKR RLTAEKDGKN LDAKTLRRLA  180
QNREAARKSR LRKKAYVQQL ESSRMKLAQL EQDLERARSQ GLLLPGASTN GGISSGAVMF  240
DMEYAQWLDE NYKHMAELQG GLQSHLPDNN LRVLVDECLK HYDEIFRLKT IAVKSDVFHL  300
ITGMWTTPAE RCFLWVGGFR PSDLLKILMP HVDPLTEQQL VGICNLQQSS QQAEEALSQG  360
LEQLQQSLAD TVASGSLSED LNVGNYMGYM AMALGKIGSL EGFVRQADNL RQQTLHQLRR  420
ILTIRQAARC FLAIGEYNNR LRALSSLWSS RPRENSIANE NGFPASTNLQ ILQPAVDAHF  480
SVF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581395.1	0.0	transcription factor TGAL5-like
Swissprot	Q6F2N0	1e-177	TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBL	A0A2I0VPR8	0.0	A0A2I0VPR8_9ASPA; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRING	XP_008787868.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-128	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Cheng CH, et al. A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]