PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00782
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 87aa    MW: 9853.22 Da    PI: 9.4431
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00782genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000111840123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C++C+k++s+   L  H+  H
  PEQU_00782 18 HACSYCSKVYSTLQALGGHQTAH 40
                67**************9999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.69E-61543No hitNo description
PfamPF139121.1E-91843IPR007087Zinc finger, C2H2
PROSITE profilePS501579.1621845IPR007087Zinc finger, C2H2
PROSITE patternPS0002802040IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MRRTSDRCSS RLISNDWHAC SYCSKVYSTL QALGGHQTAH RKEIEKMRRQ NLLRGREKAA  60
MNVQESSVNL ELTLGTGDCG LDLSLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2I0VSR61e-31A0A2I0VSR6_9ASPA; Transcriptional regulator TAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2080966
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05120.12e-08C2H2 family protein