PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s872811g002

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 1065aa MW: 117423 Da PI: 5.0279

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s872811g002	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	84.1	2.8e-26	48	187	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tk 79 lp+G++F+P+de+l+ +L++kv + + ++++ + ++e + +++P++Lp vk++ + yfF+++ k y+t++ k+ + + PDK_30s872811g002 48 LPRGVKFDPSDEDLL-WHLRAKVGKGEadphplISEFITsLDEDdGFGYTHPQKLP-GVKKDGSVSYFFHRSFKIYNTKNGKHWMvhnddSE 137 699**********.889999878865533333335555348999**.677788899******9877555542333366 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++ gk+++v++ +g++ g+kk++v+y ++ +k+ek++Wvmh+y+l PDK_30s872811g002 138 DIFWQKVGKTRPVIV-DGSHQGCKKIMVLYasMNKGKKPEKSNWVMHQYHL 187 999********.9999******7645777778*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.35E-29	42	205	IPR003441	NAC domain
PROSITE profile	PS51005	26.708	48	205	IPR003441	NAC domain
Pfam	PF02365	5.6E-13	49	187	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1065 aa Download sequence Send to blast
MKCLLDIQIL NAFDMELASR EAFIFDHAAC WRKFFFGSNR GLLEWPGLPR GVKFDPSDED 60 LLWHLRAKVG KGEADPHPLI SEFITSLDED DGFGYTHPQK LPGVKKDGSV SYFFHRSFKI 120 YNTKNGKHWM VHNDDSEDIF WQKVGKTRPV IVDGSHQGCK KIMVLYASMN KGKKPEKSNW 180 VMHQYHLGTG NAEKRELVVS KIFYENGSRQ DKKNAQELSL ETVKAIVAEA EPLVVAKLTT 240 GYHETKCNEN RACAGWRKLD KYDNCSTEDS KQRKIKSQVL SDVHQSVEGF LAGGKLHHEQ 300 FSCAAESWRT RSCISGDAQA NVKILKNNLK DISMGDCDLV SEGNKTSGLV VSSAMTSDLV 360 RSCSLNSQHL PDASSLGDTQ AYISNSNLIA SSGFKGHTAE QGGNDLLQLS NLPDHSLEIK 420 VEHSDYIQTN PRREGLEDAD MEVFTSEYEK EDLDHVTLLE RCNMLLSSTY FVSGDLSGSR 480 CCQDCRACTL KPCPNSVLHA QDSGFISKSE GNGTLLNHLG TENCGKDILG LLQDISSGPS 540 IHPPSTQVPM GECCAGSIPE SNDAKSMNNL MFDSPDRATA GFDPYLQTSR NCQLRISLQD 600 SQSLENHENN YISVCQTSGP EVKPPVQGSK CSSDHSQRLR FELSAQQVQL KVEHLEEGVL 660 CSADKNLPEK GSTASTCAAT PCTPDAKMSC LRQILADQND SDRVYDSILP TFPVEVKVKP 720 LEESGTNRVP EANAENHLSL LLSNHSTEVS RARTRSSSKD DHFQVNSSFN GNNLQENMST 780 SYLCSDQKSL PEDVINSESP KLQSSKISGF MNSTYLENSC TVSQSSAKAG NYQDNVSPSG 840 DSLFEESGRN CSDQVSFLEK VHAGASNILS NSVQVKTEPL ESGLLSKCEN HLSSFPESYM 900 LEADVKRETL DELSVDVIDH VSKVGHAMMP ISGIVSNLDY DNNLNCSQQA VPCCPVDGSV 960 NPKNAKSKMY FLYNLKNNPC RDSVETALEE DAPGLLQVLL DKGITVEEIK LYGDVEDDEA 1020 LEVSSTDDSF EELETVMTKV ANLSFNVHSL MPTAMMISFS SVIRH

Sequence ? help Back to Top

Protein Sequence Length: 1065 aa Download sequence Send to blast

MKCLLDIQIL NAFDMELASR EAFIFDHAAC WRKFFFGSNR GLLEWPGLPR GVKFDPSDED  60
LLWHLRAKVG KGEADPHPLI SEFITSLDED DGFGYTHPQK LPGVKKDGSV SYFFHRSFKI  120
YNTKNGKHWM VHNDDSEDIF WQKVGKTRPV IVDGSHQGCK KIMVLYASMN KGKKPEKSNW  180
VMHQYHLGTG NAEKRELVVS KIFYENGSRQ DKKNAQELSL ETVKAIVAEA EPLVVAKLTT  240
GYHETKCNEN RACAGWRKLD KYDNCSTEDS KQRKIKSQVL SDVHQSVEGF LAGGKLHHEQ  300
FSCAAESWRT RSCISGDAQA NVKILKNNLK DISMGDCDLV SEGNKTSGLV VSSAMTSDLV  360
RSCSLNSQHL PDASSLGDTQ AYISNSNLIA SSGFKGHTAE QGGNDLLQLS NLPDHSLEIK  420
VEHSDYIQTN PRREGLEDAD MEVFTSEYEK EDLDHVTLLE RCNMLLSSTY FVSGDLSGSR  480
CCQDCRACTL KPCPNSVLHA QDSGFISKSE GNGTLLNHLG TENCGKDILG LLQDISSGPS  540
IHPPSTQVPM GECCAGSIPE SNDAKSMNNL MFDSPDRATA GFDPYLQTSR NCQLRISLQD  600
SQSLENHENN YISVCQTSGP EVKPPVQGSK CSSDHSQRLR FELSAQQVQL KVEHLEEGVL  660
CSADKNLPEK GSTASTCAAT PCTPDAKMSC LRQILADQND SDRVYDSILP TFPVEVKVKP  720
LEESGTNRVP EANAENHLSL LLSNHSTEVS RARTRSSSKD DHFQVNSSFN GNNLQENMST  780
SYLCSDQKSL PEDVINSESP KLQSSKISGF MNSTYLENSC TVSQSSAKAG NYQDNVSPSG  840
DSLFEESGRN CSDQVSFLEK VHAGASNILS NSVQVKTEPL ESGLLSKCEN HLSSFPESYM  900
LEADVKRETL DELSVDVIDH VSKVGHAMMP ISGIVSNLDY DNNLNCSQQA VPCCPVDGSV  960
NPKNAKSKMY FLYNLKNNPC RDSVETALEE DAPGLLQVLL DKGITVEEIK LYGDVEDDEA  1020
LEVSSTDDSF EELETVMTKV ANLSFNVHSL MPTAMMISFS SVIRH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916182.1	0.0	uncharacterized protein LOC105041085 isoform X1
Refseq	XP_010916183.1	0.0	uncharacterized protein LOC105041085 isoform X2
TrEMBL	A0A2H3WXQ6	0.0	A0A2H3WXQ6_PHODC; uncharacterized protein LOC103695671 isoform X2
TrEMBL	A0A2H3WXQ9	0.0	A0A2H3WXQ9_PHODC; uncharacterized protein LOC103695671 isoform X3
STRING	XP_008775275.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7479	32	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-60	NAC family protein