PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s731031g006

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bHLH

Protein Properties

Length: 322aa MW: 35885.8 Da PI: 8.7955

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s731031g006	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.4	4.1e-06	103	152	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ + +rE+ Rd++N+ f+eL l +a ++ + Ka+iL A++ +++L PDK_30s731031g006 103 KKEHKAKREKLKRDHLNELFSELGHALEPA----KQNNGKASILGDATRLLQDL 152 5778899********************9....78899999***9998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	9.69E-4	100	152	No hit	No description
SuperFamily	SSF47459	7.2E-10	102	166	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.3E-8	102	169	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	11.096	102	152	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MKTTNWNGKL RMDEARKLEH LLYYIGAGHV DGIILCRFCK FDMVTEPLSS MTNEENVITE 60 QPVGRFRSVG LLRLLGFNLS WALLERYTGT LVPNKKNTGK VPKKEHKAKR EKLKRDHLNE 120 LFSELGHALE PAKQNNGKAS ILGDATRLLQ DLIARVGSLR KENAALVSES CYVAVEKNEL 180 IDENAVLGAE IARLRNELHE RMHTNTVWHN GAEVAPPTLP QPTSAVLPVQ QPPVGPLYVT 240 PLHQDLHPSS DTGNIPTSKP PSHVRRPHAR YPTPSDSWPL ELLSRHQRAA HEALHNSTTT 300 TTTTTTILNS REEGTDKADG SI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008808049.1	1e-173	transcription factor BHLH062-like
Refseq	XP_017701446.1	1e-173	transcription factor BHLH062-like
TrEMBL	A0A2H3Z3Y4	1e-172	A0A2H3Z3Y4_PHODC; transcription factor BHLH062-like
STRING	XP_008808049.1	1e-172	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2481	38	84

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.3	1e-26	bHLH family protein