PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1148161g002

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

BES1

Protein Properties

Length: 339aa MW: 35998.6 Da PI: 8.78

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1148161g002	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	199.8	8.6e-62	3	149	2	149
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspe 91 ++ r ptw+ErEnnkrRERrRRaiaakiy+GLRa+G++klpk++DnneVlkALc+eAGw+ve+DGttyr gskp + +aag sas sp+ PDK_30s1148161g002 3 SGARLPTWRERENNKRRERRRRAIAAKIYTGLRAYGDFKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRTGSKPAaRVDAAAGGSASPSPC 93 57899********************************************************************7788899***** PP DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 +s+q +sp++sy++sp sssfpspss+ +++++a +sl+p+l++ls++ss+ PDK_30s1148161g002 94 TSYQ--------PSPRASYNPSPPSSSFPSPSSSYVTHAHNAnqgadgTSLIPWLKNLSSASST 149 ........9***************9988888777889999********986654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.1E-63	4	144	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MPSGARLPTW RERENNKRRE RRRRAIAAKI YTGLRAYGDF KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RTGSKPAARV DAAAGGSASP SPCTSYQPSP RASYNPSPPS SSFPSPSSSY 120 VTHAHNANQG ADGTSLIPWL KNLSSASSTS SLNPPSHHHF YMHAGSISAP VTPPLSSPTA 180 RSPRVKTDWD DPASQPRWAG SQYTFLPSST PPSPGRQVIP DPAWLAGLRL PSGGPSSPTY 240 TLVSSNPFGF FCKEASAGAG SSRMWTPGQS GTCSPVPGGH AGVRVSDGIS DEFAFGSSSN 300 GNLQSNGLVK PWEGERIHEE CGSDELELTL GSSRTRSEA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-23	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-23	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-23	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-23	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP721490	1e-51	KP721490.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES3) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008792311.1	0.0	protein BZR1 homolog 3-like
Swissprot	Q5Z9E5	1e-127	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3Y2E9	0.0	A0A2H3Y2E9_PHODC; protein BZR1 homolog 3-like
STRING	XP_008792311.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-81	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]