PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100250170131

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 447aa MW: 50491.9 Da PI: 4.8178

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100250170131	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.1	2.9e-26	169	223	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ Wt e+H +F++a+e+LGG +A+Pk+i+e+m+v++Lt+e+v+SHLQkYR Ote100250170131\|100250170131 169 KPRVTWTAEMHGKFLDAIERLGGYLNAVPKRIVEVMGVPDLTRENVASHLQKYRE 223 79****************************************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52172	1.9E-5	14	117	IPR011006	CheY-like superfamily
Gene3D	G3DSA:3.40.50.2300	8.4E-7	16	90	No hit	No description
Gene3D	G3DSA:1.10.10.60	3.4E-25	166	226	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-16	167	227	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.0E-23	169	223	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence Send to blast
MYAEIGANIE AIISIGILLV NDDQTCQNNV TEVLQYCKHQ VLHTGTVYDA LHAIWENRDR 60 LDLVITNAHK LSSEGLAIIE NIKQKLEMNV LLIENDERIE PKGRPLSFSA YVLNDLSVKG 120 FDILLGDARR AENAAVAPNK ASSLTNDAET TERNDNDNDN RNNHRASKKP RVTWTAEMHG 180 KFLDAIERLG GYLNAVPKRI VEVMGVPDLT RENVASHLQK YRESMKSTRN ELGALDFSTL 240 ATFQANLASF PHRIPTLRES NLHYTTASPD LSFGSISTGF SHISDHRNGL DKLRNTTRSR 300 ERSSLCSKFV GYRFEGNSIY YGPVKNINND CILQHSSFRC HQPVSTIQEQ GLLSTCSPKI 360 EEDVRINQHP HHQDLSFSSQ EENGNDFVND ILEQHFSPPS PLPQLSEDLE DIFNQSRNDD 420 EAMINGTENE CEFDFPELDD SFFDQDD

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence Send to blast

MYAEIGANIE AIISIGILLV NDDQTCQNNV TEVLQYCKHQ VLHTGTVYDA LHAIWENRDR  60
LDLVITNAHK LSSEGLAIIE NIKQKLEMNV LLIENDERIE PKGRPLSFSA YVLNDLSVKG  120
FDILLGDARR AENAAVAPNK ASSLTNDAET TERNDNDNDN RNNHRASKKP RVTWTAEMHG  180
KFLDAIERLG GYLNAVPKRI VEVMGVPDLT RENVASHLQK YRESMKSTRN ELGALDFSTL  240
ATFQANLASF PHRIPTLRES NLHYTTASPD LSFGSISTGF SHISDHRNGL DKLRNTTRSR  300
ERSSLCSKFV GYRFEGNSIY YGPVKNINND CILQHSSFRC HQPVSTIQEQ GLLSTCSPKI  360
EEDVRINQHP HHQDLSFSSQ EENGNDFVND ILEQHFSPPS PLPQLSEDLE DIFNQSRNDD  420
EAMINGTENE CEFDFPELDD SFFDQDD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1irz_A	2e-16	166	226	2	61	ARR10-B

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3659	16	20