PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100249220141

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 271aa MW: 30488.7 Da PI: 8.9951

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100249220141	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.9	6.3e-25	11	61	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rl+Wt+eLH+ F +av+q+GG+++AtPk il++m ++gLt+ hvkSHLQ Ote100249220141\|100249220141 11 KERLKWTKELHDLFEKAVNQIGGPDRATPKGILKAMAIPGLTIFHVKSHLQ 61 68************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.58E-14	8	62	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.623	8	68	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.6E-23	9	61	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.6E-20	11	63	IPR006447	Myb domain, plants
Pfam	PF00249	2.8E-6	13	61	IPR001005	SANT/Myb domain
Pfam	PF14379	4.7E-18	107	151	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MGSNRANCSS KERLKWTKEL HDLFEKAVNQ IGGPDRATPK GILKAMAIPG LTIFHVKSHL 60 QVSLSRKTEN TGCPCSHEKK TIQKASSKDE VYQRCFPTSL LSRKGAQLNE ALLIQMEAQR 120 RLSDQLEVQK SLKMKIEAQG RFLDKIMEEY KNRSPGTKQI KPYSPVLSLP SLSEESDQSN 180 GKEFESDSSE VGEISSKEEF RAQKRIKIQE QNVMPQINRA PSFNLDSQSL NLFCLDGISK 240 NLYSDQEMGC PWGGNAFSSP LLLGMYNQLN Q

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-17	11	61	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	11	61	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	11	61	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	11	61	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-17	11	61	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077547.1	1e-121	myb family transcription factor PHL7
Refseq	XP_011077550.1	1e-121	myb family transcription factor PHL7
Refseq	XP_020549678.1	1e-121	myb family transcription factor PHL7
TrEMBL	A0A022QJI3	1e-109	A0A022QJI3_ERYGU; Uncharacterized protein
STRING	Migut.L02017.1.p	1e-109	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10101	20	26