PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100246550041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 187aa MW: 21655.5 Da PI: 8.6453 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.6 | 2.8e-20 | 27 | 79 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k Ote100246550041|100246550041 27 KKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 79 55699***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 123.5 | 1e-39 | 26 | 116 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLek 82 kk+rls+eq+++LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yda+++++++L++ Ote100246550041|100246550041 26 KKKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDAVSRDKHKLQQ 106 9******************************************************************************** PP HD-ZIP_I/II 83 eveeLreelk 92 ev +Lr+ lk Ote100246550041|100246550041 107 EVLALRAILK 116 ******8876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 17.297 | 21 | 81 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 7.7E-19 | 22 | 82 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 3.5E-18 | 24 | 85 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.20E-16 | 26 | 82 | No hit | No description |
Pfam | PF00046 | 2.0E-17 | 27 | 79 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 4.1E-21 | 28 | 88 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 5.0E-6 | 52 | 61 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 56 | 79 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 5.0E-6 | 61 | 77 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 1.4E-7 | 81 | 115 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MKXXXXXXXX XXXXXXXXXX XXHDPKKKRL STEQLESLEN SFQEEIKLDP DRKMKLAKEL 60 GLQPRQIAVW FQNRRARWKG KQLERLYDAL KQEYDAVSRD KHKLQQEVLA LRAILKDQVA 120 KKQVSTGYTD VSGEETVEST SIPSSDKGRG DQTNNQMGEC NYVLNVDDYT PMMMTPNYNW 180 GGLPSCP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094442.1 | 9e-95 | putative homeobox-leucine zipper protein ATHB-51 | ||||
Swissprot | Q9LZR0 | 7e-51 | ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51 | ||||
TrEMBL | A0A4D9C620 | 5e-98 | A0A4D9C620_SALSN; Homeobox-leucine zipper protein | ||||
STRING | Migut.J00491.1.p | 2e-92 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3869 | 22 | 46 |
Publications ? help Back to Top | |||
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