PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100232330061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | CAMTA | ||||||||
Protein Properties | Length: 814aa MW: 91481 Da PI: 5.0635 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 184.2 | 1.4e-57 | 20 | 136 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 +e ++rwl++ ei++iL+n++k++++ e+++rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+ Ote100232330061|100232330061 20 QEaQHRWLRPAEICEILQNHHKFRIAPEPPNRPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLH 100 5559***************************************************************************** PP CG-1 83 cyYahseenptfqrrcywlLeeelekivlvhylevk 118 cyYah+een++fqrr+yw+Leeel++ivlvhy+evk Ote100232330061|100232330061 101 CYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136 *********************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 85.627 | 15 | 141 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 2.1E-81 | 18 | 136 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.2E-50 | 21 | 134 | IPR005559 | CG-1 DNA-binding domain |
SuperFamily | SSF81296 | 7.7E-10 | 553 | 627 | IPR014756 | Immunoglobulin E-set |
SuperFamily | SSF48403 | 1.71E-11 | 711 | 783 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 1.6E-10 | 712 | 783 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 2.48E-8 | 712 | 778 | No hit | No description |
PROSITE profile | PS50297 | 13.283 | 715 | 782 | IPR020683 | Ankyrin repeat-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 814 aa Download sequence Send to blast |
MAESRRYALN AQLDIEQILQ EAQHRWLRPA EICEILQNHH KFRIAPEPPN RPPNGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML 120 EEELSHIVLV HYREVKGNRT NFNRVRDGDS LPSSRQAEDV SNSDADSSAA SRFQSYDYQR 180 ASPITDATSL NSTLASDLED AQSAYRHQAS PIFHSIHDLQ SPSISTTVAS PTPYHPIPIS 240 SNYQGQSSAI SGMSFGPITQ GEENKSLIDS GLKYDYQQDM GFSSWGNVAE SSSASYQSVD 300 FQLSLPSTQS SAMSMMPVQD NELLDHVFSG AFTKKQEFGN HSDGLGEWQA PDGSLHMPKW 360 SIDQKSDSNL NLGQNPNHPS LRQPLLYDLA TKLNDTNQVG LSDSMGLHTA YVTDQNREPL 420 ENDLQLQALS SLKSELDGNL NAGDKANYPA PRKPLLDGVM REGLKKLDSF DRWISKELDD 480 VAESTIQSDS GVYWETVGGG DVDDSGISTQ VPSDNFVLGP SLSQDQLFSI IDFSPNWTYS 540 GSEIKRVTYF CLSHVQVLVM GRFMKSREVA DYKWACMFGE IEVPAEVVGD GVLRCLAPSH 600 EXXGRVPFYI TCSNRLACSE VREFEFRADS DENRLRMRFG KLLSLGSGTS QTSFQNIDEE 660 TSQIYSKISA LLKDDTEWEE MLSVTKKDEM SSDKVKDQSD QLLQKLLKEK LHNWLLQKIA 720 EGGKGPNVLD EEGLGVLHYA AALGYDWAIP PTIAAGVSIN FRDVNGWTAL HWAAYYGRWE 780 FLTFTYNNPF AANATFCSSV DHLHSSSLEH SFWA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097567.1 | 0.0 | calmodulin-binding transcription activator 1-like | ||||
Refseq | XP_011097568.1 | 0.0 | calmodulin-binding transcription activator 1-like | ||||
TrEMBL | A0A4D8Z707 | 0.0 | A0A4D8Z707_SALSN; Uncharacterized protein | ||||
STRING | XP_009763882.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2230 | 21 | 46 |