PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100198120061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Trihelix
Protein Properties Length: 258aa    MW: 27627.1 Da    PI: 10.1268
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100198120061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix100.21.7e-3156140187
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                                   rW++qe+laL+++r++m+ ++r+++lk+plWeevs+km+e gf+rs+k+Ckek+en+ k++k++k+g+ ++++++s  +++
  Ote100198120061|100198120061  56 RWPRQETLALLKIRSDMDVTFRDASLKGPLWEEVSRKMAELGFQRSAKKCKEKFENVFKYHKRTKDGRASKSDGKS--YRF 134
                                   8*********************************************************************866665..*** PP

                      trihelix  82 fdqlea 87 
                                   fdqlea
  Ote100198120061|100198120061 135 FDQLEA 140
                                   ****85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.005253115IPR001005SANT/Myb domain
PROSITE profilePS500906.82955113IPR017877Myb-like domain
PfamPF138371.9E-2055140No hitNo description
CDDcd122031.10E-2757120No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MLGVAGLMSS SAVDGAAAER GGGSGGSSEV GASSSMAVGG VGEENERIGG GGGGNRWPRQ  60
ETLALLKIRS DMDVTFRDAS LKGPLWEEVS RKMAELGFQR SAKKCKEKFE NVFKYHKRTK  120
DGRASKSDGK SYRFFDQLEA XXLENTSPNH FTXXXXXXXX XXXXXXXSTV PIPSHVTVPS  180
ASPIPLSVVP PKMVTINAIN SSSFQPSQPQ LQPQLVASAP PPPXXXXXXX XXXXXXXXTR  240
TYSGGAGGSG NGKTIWRD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074760.11e-69trihelix transcription factor GT-2-like
TrEMBLA0A2G9GE443e-64A0A2G9GE44_9LAMI; Transcription factor GT-2
STRINGMigut.C01017.1.p1e-58(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24022459