PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100198120061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Trihelix | ||||||||
Protein Properties | Length: 258aa MW: 27627.1 Da PI: 10.1268 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 100.2 | 1.7e-31 | 56 | 140 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rW++qe+laL+++r++m+ ++r+++lk+plWeevs+km+e gf+rs+k+Ckek+en+ k++k++k+g+ ++++++s +++ Ote100198120061|100198120061 56 RWPRQETLALLKIRSDMDVTFRDASLKGPLWEEVSRKMAELGFQRSAKKCKEKFENVFKYHKRTKDGRASKSDGKS--YRF 134 8*********************************************************************866665..*** PP trihelix 82 fdqlea 87 fdqlea Ote100198120061|100198120061 135 FDQLEA 140 ****85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.0052 | 53 | 115 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 6.829 | 55 | 113 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.9E-20 | 55 | 140 | No hit | No description |
CDD | cd12203 | 1.10E-27 | 57 | 120 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MLGVAGLMSS SAVDGAAAER GGGSGGSSEV GASSSMAVGG VGEENERIGG GGGGNRWPRQ 60 ETLALLKIRS DMDVTFRDAS LKGPLWEEVS RKMAELGFQR SAKKCKEKFE NVFKYHKRTK 120 DGRASKSDGK SYRFFDQLEA XXLENTSPNH FTXXXXXXXX XXXXXXXSTV PIPSHVTVPS 180 ASPIPLSVVP PKMVTINAIN SSSFQPSQPQ LQPQLVASAP PPPXXXXXXX XXXXXXXXTR 240 TYSGGAGGSG NGKTIWRD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074760.1 | 1e-69 | trihelix transcription factor GT-2-like | ||||
TrEMBL | A0A2G9GE44 | 3e-64 | A0A2G9GE44_9LAMI; Transcription factor GT-2 | ||||
STRING | Migut.C01017.1.p | 1e-58 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2402 | 24 | 59 |