PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100191440071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 319aa MW: 35558.1 Da PI: 8.9472 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.8 | 1.3e-29 | 159 | 218 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++v+ tYegeHnh Ote100191440071|100191440071 159 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSIVVATYEGEHNHA 218 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.8E-29 | 150 | 220 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 26.073 | 154 | 220 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-25 | 156 | 220 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.7E-34 | 159 | 219 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-24 | 160 | 217 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009617 | Biological Process | response to bacterium | ||||
GO:0009620 | Biological Process | response to fungus | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MEFTSLLNSS LDLNAKPLRF LDESPPLKHQ VLESSFIGLG RNAVTVKEEK GALMEELNRL 60 SAENKKLTEM LTVMCENYTE LRNQLLEYTS KKSDRNASSR KRKSESSNNE NFERLNLGPS 120 ESSSSDEESS KKLKEEHHIK AKISRVCVRT EASDTSLIVK DGYQWRKYGQ KVTRDNPCPR 180 AYFKCSFAPT CPVKKKVQRS VEDQSIVVAT YEGEHNHAQP SSKVESTNSG SNKSPVLGTV 240 PCLTSVSSTG PTITLDLTKP KPVKEESRNV GGKVDAPELQ QYFVEQMAST LTKDPNFKAA 300 LAAAISGKFL QSNNQTEKW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 6e-20 | 144 | 220 | 1 | 74 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250|UniProtKB:Q9SUP6}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082382.1 | 1e-149 | probable WRKY transcription factor 40 | ||||
Swissprot | Q9SAH7 | 2e-92 | WRK40_ARATH; Probable WRKY transcription factor 40 | ||||
TrEMBL | A0A4D9AFX4 | 1e-174 | A0A4D9AFX4_SALSN; Uncharacterized protein | ||||
STRING | Migut.I00695.1.p | 1e-128 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2855 | 24 | 50 |