PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100180970021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family HD-ZIP
Protein Properties Length: 733aa    MW: 81009.5 Da    PI: 6.6752
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100180970021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37e-2046100256
                                   T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                      Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                   +k +++t+ q++eLe++F++n++p++++r eL k+l+L+ +qVk+WFqNrR+++k
  Ote100180970021|100180970021  46 KKYHRHTAFQIQELEAAFKNNPHPDEKARLELGKRLRLEGKQVKFWFQNRRTQMK 100
                                   678899**********************************************999 PP
2START123.13.7e-392524882205
                                   HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT- CS
                         START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWd 73 
                                   +a +a++el+k+a+++ p+W++ss    es+n de+ + f++  +     + +ea ra+ +v  ++  lve l+d+k qW+
  Ote100180970021|100180970021 252 IAMAAMDELMKLAQLDGPVWFRSSegngESLNLDEYSKMFSSCIGvklshFVTEATRATDNVMINSISLVEALMDVK-QWT 331
                                   57799***********************************888779**999**************************.*** PP

                                   TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--...... CS
                         START  74 etla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe..... 138
                                   e ++     a++l+ is g      g+lqlm++e+q +sp+vp R   fvR+++++g++ w++vd+S+d   + +      
  Ote100180970021|100180970021 332 ELFPwnigGASILDIISHGlagnkdGTLQLMQSEFQIPSPMVPiRQMKFVRFCKKHGEDMWAVVDISIDTLLHGNVpvxlp 412
                                   *********************************************************************999887767666 PP

                                   .-TTSEE-EESSEEEEEEEECTCE.........EEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                         START 139 .sssvvRaellpSgiliepksngh.........skvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                                     +   R+ +++   l++++  ++          +vtw+eh++++++++h l+r+l++ g+a+ga++w++ lqrqce
  Ote100180970021|100180970021 413 kAPFRLRCARHTE-WLFKDMMPPPslshinacvHTVTWIEHTEYDESVVHHLYRPLLRFGIAFGAQKWLSNLQRQCE 488
                                   3444468877765.45555555556999***7779*****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.19E-1835102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-1939110IPR009057Homeodomain-like
PROSITE profilePS5007116.35842102IPR001356Homeobox domain
SMARTSM003891.2E-1544106IPR001356Homeobox domain
PfamPF000461.8E-1746100IPR001356Homeobox domain
CDDcd000861.95E-1646102No hitNo description
PROSITE profilePS5084831.219242492IPR002913START domain
SuperFamilySSF559612.06E-21242488No hitNo description
CDDcd088751.08E-84246488No hitNo description
SMARTSM002342.3E-17251489IPR002913START domain
PfamPF018525.1E-32252488IPR002913START domain
SuperFamilySSF559616.04E-16510723No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MENLVEMGLI GESYDSGLIA RAREEELESA SGDDEESTHK KGSRGKKYHR HTAFQIQELE  60
AAFKNNPHPD EKARLELGKR LRLEGKQVKF WFQNRRTQMK TQLERHENSV LRQDNDKLRN  120
ENFAMKEAMR NPICENCGSP AILGEVPIEQ HHLMIENARL KDELNRLRHL ATKVFGKSNV  180
VSAPPIMSHS TLDLSVGRNG FGGLNSLDPG IPLGRDFGNR VSNTFSVMSV NAPAMNTMSV  240
SPPLEKSLFL DIAMAAMDEL MKLAQLDGPV WFRSSEGNGE SLNLDEYSKM FSSCIGVKLS  300
HFVTEATRAT DNVMINSISL VEALMDVKQW TELFPWNIGG ASILDIISHG LAGNKDGTLQ  360
LMQSEFQIPS PMVPIRQMKF VRFCKKHGED MWAVVDISID TLLHGNVPVX LPKAPFRLRC  420
ARHTEWLFKD MMPPPSLSHI NACVHTVTWI EHTEYDESVV HHLYRPLLRF GIAFGAQKWL  480
SNLQRQCELF ASIILSPASN VDHSAISPNG KRSIVKLAQR MSRSFCTGVC STVDEWEVVQ  540
DVDNTKLMTW KSMGCSGVPP GVILSASTTV WMPAPPQRLL DFLQNEKTRS HWDVLSQDGP  600
MRAMLRIPKG QDLDNNISVL HASTPSDTNP SSVVILQETC GDAMGSLVVH AAVPSAEMNV  660
VMSGGESSTV PILPSGFAIF PDGGGGSGSL LTIGFQILVS NLPAAQLTME SVDTVKSLIA  720
RTHHGIKAGL DCN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076208.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A4D9BN740.0A0A4D9BN74_SALSN; Homeobox-leucine zipper protein
STRINGMigut.F00362.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]