PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100151020011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | C2H2 | ||||||||
Protein Properties | Length: 76aa MW: 8500.83 Da PI: 9.5489 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.4 | 5.3e-05 | 2 | 25 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + Ote100151020011|100151020011 2 YVCKRCNrKQFSVLSDLRTHEKHC 25 9*******************9876 PP | |||||||
2 | zf-C2H2 | 13.2 | 0.00027 | 33 | 48 | 5 | 20 |
TTTEEESSHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHi 20 Cg++Fsrk+ L+ H Ote100151020011|100151020011 33 SCGTTFSRKDKLMGHV 48 5************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 3.1E-4 | 24 | 48 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MYVCKRCNRK QFSVLSDLRT HEKHCGDQKW QCSCGTTFSR KDKLMGHVAL FVGHAPAANC 60 LIKTGGNGSV VMENNR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028052411.1 | 4e-36 | protein SENSITIVE TO PROTON RHIZOTOXICITY 2-like | ||||
Refseq | XP_028101965.1 | 4e-36 | protein SENSITIVE TO PROTON RHIZOTOXICITY 2-like | ||||
Swissprot | Q0WT24 | 2e-27 | STOP2_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 | ||||
TrEMBL | A0A2R6P7E6 | 4e-35 | A0A2R6P7E6_ACTCH; Protein SENSITIVE TO PROTON RHIZOTOXICITY like | ||||
STRING | Migut.N02542.1.p | 2e-35 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11265 | 22 | 25 |