PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100091510011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 26863.8 Da PI: 5.9742 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.3e-09 | 181 | 220 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +RR+ri +++ +L+el+P+ K++ +++LekA+ Y+k Lq Ote100091510011|100091510011 181 NRRERISERLKTLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 220 8******************5.....5******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.903 | 170 | 219 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-8 | 173 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.84E-12 | 181 | 228 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.93E-11 | 181 | 224 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.4E-11 | 181 | 227 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-6 | 181 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MANESAAMAI IQASTFYDQD FANPSLIQTP SNSSPENHVY GGSPEKAAGK NFTVSNSSTV 60 SSPSXXXXXX XXXXXXGLGF QEGNSVITFK PNFAHVNGLF LTFDHTKIKP KMISEEDEYS 120 MWAGDHHHDL HYMGSMNSAA GHGPPETFSS HHAAAEQWAW LNDQVESGGQ EAANNKRPST 180 NRRERISERL KTLQELVPNG SKVDLVTMLE KAISYVKFLQ LQVKVLATDE FWPVQGGKAP 240 DLSQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012855794.1 | 5e-70 | PREDICTED: putative transcription factor bHLH086 | ||||
TrEMBL | A0A2G9HP37 | 5e-67 | A0A2G9HP37_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H00272.1.p | 6e-68 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9986 | 21 | 26 |