PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100030470041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 507aa    MW: 56864.6 Da    PI: 7.8826
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100030470041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025442464123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++Cp C+++F++   L  H r+H
  Ote100030470041|100030470041 442 HVCPFCDRVFKNGQALGGHKRSH 464
                                   79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003553.6931IPR015880Zinc finger, C2H2-like
PfamPF139122.3E-4931IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.76107129IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.307107134IPR007087Zinc finger, C2H2
PfamPF139124.4E-6108131IPR007087Zinc finger, C2H2
SuperFamilySSF576671.0E-4108129No hitNo description
PROSITE patternPS000280109129IPR007087Zinc finger, C2H2
SuperFamilySSF576671.0E-4360378No hitNo description
PfamPF139120.013365390IPR007087Zinc finger, C2H2
SMARTSM003550.015442464IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.141442464IPR007087Zinc finger, C2H2
PfamPF139125.9E-8442464IPR007087Zinc finger, C2H2
PROSITE patternPS000280444464IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MDDDQELRFV CKLCFKKYPC GKSLGGHMRS HVVANSAESE EKLDPNMKRY SAFVVGDGGG  60
GIQGETQTMN DPRIGDLGNG QSSYGLRENP RKSWRAVDSI FPLPQEKICK QCGKGFHSLK  120
ALCGHMACHS EKDRSLKDDH SWTSENQKLV MDSHSDTEAE DQIIRTRSSK SKRFSKIIVK  180
SPFPLANNGS SSASEIDGDE QEEVAICLMM LSRDCGFKGG VNSVVESSDN NSIILETKSS  240
SIDMRPGKRD VVKNTNDQDE TLKLKKIEDV KSKGCAFDVE NAKMENSDSG YFLDECGKAE  300
SDVSVDGFRR NGGVGEYDEF RQSFNRSKSY RAELKRVNEY NYDRYRRNDP PIAEMCNTSQ  360
KRHKYECFNC KKSFXXXYQA LGGHRPCHKK SNAVHESRQD SGENSLDDSP DFAARGKLTS  420
YKKTSGKNLS EKKLKAKKSK GHVCPFCDRV FKNGQALGGH KRSHFIGSHD VNNNPSPVSK  480
LDLLDLNMPA PKDDEDDDRN DQYSPWV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070953.10.0zinc finger protein 91-like
TrEMBLA0A2G9HWQ10.0A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-160(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255