PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100015190091
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Trihelix
Protein Properties Length: 317aa    MW: 35079.4 Da    PI: 5.1272
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100015190091genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.92.3e-124380138
                      trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm 38
                                  rW++qe+laL+++r+em+ ++r+++lk+plWe+vsk  
  Ote100015190091|100015190091 43 RWPRQETLALLKIRSEMDATFRDASLKGPLWEDVSKTY 80
                                  8**********************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MMLGVSGLMS GGGSGGSSEL GTSSSAPVGG GVEEHDRIGG GNRWPRQETL ALLKIRSEMD  60
ATFRDASLKG PLWEDVSKTY SNTIKEQKEQ XSDGKSYRFF DQLEAFENTY NHFTPPAAAT  120
AAPVNPPPIP IPSNVDNTTV PSESPVPLSV IPPINSSFQP SQPQLQSQST SSSTSSDEDL  180
QPRSRKRKWK DQLERLMTDV VQKQDELQKK FLEALEKRER DRIAREEAWR SQEIAMINRE  240
HDLLAQERSI AAARDAAVIA FLQKVTSQTD FQIPQPQSQS VEAAKPTPDR DNGGDDQISG  300
NSSXXXXXXX XXRRWKP
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022885875.15e-72trihelix transcription factor GT-2-like
RefseqXP_022885876.15e-72trihelix transcription factor GT-2-like
SwissprotQ391173e-50TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A4D8ZZY46e-79A0A4D8ZZY4_SALSN; Uncharacterized protein
STRINGSolyc12g056510.1.11e-65(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24022459