PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100001550121 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB | ||||||||
Protein Properties | Length: 179aa MW: 20561 Da PI: 6.1471 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.2 | 8.8e-09 | 15 | 61 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT eEd+++ + ++ + +W++Ia+++g ++++ ++ ++ + Ote100001550121|100001550121 15 RWTWEEDKQFEVCLVEFAQDsanRWDRIAARLG-TKSAAEVERHYAVL 61 9****************999*************.**********9765 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 109 | 153 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+Wk+I+r++ ++R + q+ s+ qk+ Ote100001550121|100001550121 109 PWTEEEHRLFLLGLEKYGKGDWKSISRYVVLTRNPTQVASHAQKH 153 8******************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 3.8E-7 | 12 | 64 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 6.516 | 14 | 62 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 5.5E-5 | 14 | 62 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.56E-10 | 15 | 69 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.2E-7 | 15 | 61 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.02E-6 | 15 | 62 | No hit | No description |
PROSITE profile | PS51294 | 18.647 | 102 | 158 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.31E-16 | 103 | 159 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-14 | 105 | 157 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 5.5E-12 | 106 | 156 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.1E-11 | 108 | 154 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.47E-9 | 109 | 154 | No hit | No description |
Pfam | PF00249 | 1.9E-12 | 109 | 153 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MANTSESDSA AELSRWTWEE DKQFEVCLVE FAQDSANRWD RIAARLGTKS AAEVERHYAV 60 LLDDVAAIEA GMIEPPVYSE KDVAQSSEPQ SCPKIEKKQM SVQRKAGRPW TEEEHRLFLL 120 GLEKYGKGDW KSISRYVVLT RNPTQVASHA QKHFERQDKE DQNKKRRSIF DSSISETKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095585.1 | 4e-97 | transcription factor DIVARICATA-like | ||||
Swissprot | Q8S9H7 | 7e-44 | DIV_ANTMA; Transcription factor DIVARICATA | ||||
TrEMBL | A0A4D9B7Y8 | 6e-98 | A0A4D9B7Y8_SALSN; Uncharacterized protein | ||||
STRING | Migut.M01627.1.p | 2e-92 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14988 | 6 | 9 |
Publications ? help Back to Top | |||
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