PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oropetium_20150105_11990A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 383aa MW: 40817.3 Da PI: 5.6316 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 179 | 236 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l +l+ l++e Oropetium_20150105_11990A 179 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLAMLQRDTGGLTNE 236 9********************************************9998776666665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-17 | 175 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.967 | 177 | 240 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-8 | 179 | 228 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.1E-11 | 179 | 233 | No hit | No description |
SuperFamily | SSF57959 | 4.43E-11 | 179 | 229 | No hit | No description |
CDD | cd14703 | 2.46E-23 | 180 | 229 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 383 aa Download sequence Send to blast |
MDSAPTADPA AAASASTSAA ATSRDVAAML PDSPPRRGAG HRRAQSEILL GGALPDDLTF 60 DADLGVVGEA GGGDEYEEYD DEDEDEGAGG SGASGSRMFE MFLENSARLP EPTESSPQPH 120 LQAPPAAPPS RPRHQHSISM DGSTSLGSAA AGMPGRPGAD AKKAISDAKL AELALVDPKR 180 AKRILANRQS AARSKERKMR YIAELERKVQ TLQTEATTLS AQLAMLQRDT GGLTNENSDL 240 KIRVQTMEQQ VRLQDALNDR LRDEIQQLKI ATGQVNANIG KMGNFGLPSY GGNPQSYQRT 300 QIQSLLAAQQ LQQLQIHSQH QQQQTHLQQQ HLSTAQQQQQ LLLQEALPFP GDLKMRGLAT 360 TSLSPNAGAS DSHAVNSEKN LA* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Oropetium_20150105_11990A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | NP_001353704.1 | 1e-171 | uncharacterized protein LOC100382174 | ||||
Swissprot | Q04088 | 3e-87 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | C0PDU9 | 1e-170 | C0PDU9_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM2G112483_P01 | 1e-170 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G06070.1 | 3e-67 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Oropetium_20150105_11990A |
Publications ? help Back to Top | |||
---|---|---|---|
|