PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA09G0142900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 246aa MW: 26844.4 Da PI: 10.6209 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.9 | 1.9e-17 | 122 | 168 | 4 | 50 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++r rr++kNRe+A rsR+RK+a++ +Le++v++L++eNk+L+ + e ORGLA09G0142900.1 122 DRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQENKMLRVKYE 168 789***************************************97766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-14 | 119 | 183 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.0E-16 | 121 | 169 | No hit | No description |
PROSITE profile | PS50217 | 11.277 | 121 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-15 | 122 | 169 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.56E-12 | 123 | 177 | No hit | No description |
CDD | cd14707 | 1.55E-19 | 123 | 169 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 126 | 141 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MEDDEDMWAN TSSPSASPPR PRGFISTALS LNSTHLQGLL PSSFVDAAAS PCHASGNNNG 60 GGDGRNAAPM SSIFSASASY HQQQHHLPAP APLDGAILPA RRFGLDMCAA AAAPAGVPAA 120 GDRRKRRMIK NRESAARSRA RKQARVNNLE TEVEQLKQEN KMLRVKYEQV IHPWMQLARP 180 SSIPIDRSAC CCCCSITDNF ASASPPRFDS SRRRRQLRKT VEVPVPVRRT LQRGHSGQWL 240 EKPSLA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA09G0142900.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015611345.1 | 3e-90 | uncharacterized protein LOC9271661 | ||||
TrEMBL | I1QQV0 | 1e-180 | I1QQV0_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA09G0142900.1 | 0.0 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |