PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA06G0234600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 168aa MW: 18343.7 Da PI: 8.7084 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 57.8 | 2.4e-18 | 96 | 153 | 3 | 60 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +++r++r+++NRe+A rsR+RK+a++eeLe++v L N Lkk+ +elk+eva+l ORGLA06G0234600.1 96 DDRRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCKELKQEVAALV 153 589***************************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-16 | 94 | 152 | No hit | No description |
SMART | SM00338 | 4.6E-15 | 94 | 158 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.783 | 96 | 152 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-15 | 97 | 153 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.97E-18 | 98 | 152 | No hit | No description |
SuperFamily | SSF57959 | 4.11E-13 | 98 | 152 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MANYHHQEYY QMAAAAAAAV AWPREPDSPQ LSIMSGCSSL FSISTLRDDD DGGVRLAGAA 60 LPATPVSLAG IAGGASTPGG DEVDMEVRQQ SGGSGDDRRT IRMMRNRESA LRSRARKRAY 120 VEELEKEVRR LVDDNLNLKK QCKELKQEVA ALVMPTKSSL RRTSSTQF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA06G0234600.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT834745 | 0.0 | CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence. | |||
GenBank | CT834747 | 0.0 | CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence. | |||
GenBank | CT834748 | 0.0 | CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015642449.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643092.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643093.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643094.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643106.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643107.1 | 1e-111 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
TrEMBL | I1Q5D3 | 1e-120 | I1Q5D3_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA06G0234600.1 | 1e-121 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-11 | bZIP family protein |